Daucus carota (carrot): 108208696
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Entry
108208696 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108208696 isoform X2
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108208696
Membrane trafficking [BR:
dcr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
108208696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
ANAPC4_WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_ELP1_2nd
Beta-prop_VPS8
WDR55
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
108208696
NCBI-ProteinID:
XP_017234707
UniProt:
A0A166E526
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All DBs
Position
2:45655588..45669271
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AA seq
1125 aa
AA seq
DB search
MYMTYGWPQVIPLESGNCPTSERIIYLKVLNRLLLVVAPSHLELWTSSQHRVRLGKYKRD
SESILKEGENSQAVWSPDGKFIAVLTASFYLHILKVQFTDKRIHLGGKQPSSLYLASISL
LLNEQVPSLKTGLNVSNLICDNKNLLFGLSDGSLYNISWKGEFAGPFELDFNLGNSNEAS
TTTRSLENGVSFGRIQTVPVCSQNLSKKSAVTCLEFSMSLRLLFVLFSDGQLVLCSVSKK
GLKQADSIKAEKQLGPGDATCTSVASEQKILAVGTRRGIVELYDLAESVSIIRSVSVYDW
GYSMDYTGAVSCISWTPDQSAFAVGWKFRGLTVWSVSGCRLMSTIRQTGLSTVSSPVNKS
NHDFKHEPILGGTSLLQWDEYGYKLYAIEEGSSERIIAFSFGKCCLNRGVSGSTYVRQVV
YGEDRLLVVQSEVTEELKLLHINLPVSYISQNWPILHVAASKDGMFLAVAGLHGLIIYDV
RLNKWRLFGDITQEQKIQCRGLLWMGKIVVVCNYDDSSNTYELLFYPRYHLDQSSLLYQK
PLLAQPMVMDVYQDYLLVTYRPFDVHIFHVKISGELTPSSTAYLQLSTVRELSIMTAKNH
PSAMRFIPDQHKRDYIPGKSMSSSLDLSAKEPVRCLILRTNGGLSVLDLHDGREKDLTDS
IELFWVTCGQSDEKTNLIGEVSWLDYGHRGMQVWYPSSGLEPFQQEDFLQLDPELEFDRE
VYPLGLLPNAGIVVGVSQRMSFAACTEFPCFEPTPQAQTILHCLLRHLLQRNKNEEALQL
ALLSAEKPHFCHCLEWLLFTVFEADISRQSPSKNRRLNPDNFSSCSLLEKTCDLIKKFPE
YFDVVVSVARKTDGRHWADLFSAAGRSTELFEECFQRRWYRTAAGYILVIAKLEGPAVSQ
YCALRLLQATLDESFYELAGELVRFLLRSGREYDPPASDSEKLSPRFLGYFSVPSSFRRQ
SVEPKSPPFKEQNAHVASVKNILESHASYLMSGKELSKLVAFVKGTQFDLVEYLQRERYG
SARLDDFASGLELIGQKLQMGILQSRLDAEFLLAHMCSVKFKEWIVVLATLLRRSEILFD
LFQHDMRLWKAYSTTIQSHSAFTEYHDLLEALEEKLSSTKESEEE
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtatatgacatacggatggccacaagtgatcccgctagaatcaggcaattgccctaca
tcggagcgcatcatttacctcaaagtgttgaatcgcttgttgctcgttgtggctccttct
catctcgagctctggacctcttctcagcatagagtgagactggggaagtataaaagagat
tccgagtcgattctcaaggaaggcgagaattcgcaagctgtttggagtcctgatggcaaa
ttcattgccgttcttacggcttctttttatcttcacatattgaaggtccagttcacggat
aaaagaatccatttaggtggaaagcaaccatcaagtctgtatcttgcctccatttcttta
ttgctcaatgagcaggtgccttctctcaaaacgggattgaatgtgagcaatctaatttgc
gacaataaaaacttgctctttggactctctgatggatcattgtacaacatatcctggaag
ggtgagtttgctggaccctttgaacttgattttaacttggggaacagcaacgaagcttct
acaacgacacgatcactggagaatggtgtttcttttggacggattcaaactgttcctgtt
tgcagtcaaaatttatccaaaaagtctgctgttacatgtctggagttctcaatgtcctta
aggctgttatttgtgttgttctctgatggacaattagttttatgttctgtaagtaagaaa
ggtctgaagcaagctgattctattaaagcggagaagcaattgggtcctggtgatgcaaca
tgtacttcagttgcttcagagcaaaaaattcttgctgttggtacaagacgaggcatagta
gaattgtatgaccttgcagaatctgtttcaattatccgttcggtatcagtatatgattgg
ggctattcaatggattatactggcgcagtcagttgtatttcatggactccagatcaatct
gcttttgctgttggatggaagttcagaggacttacagtctggtccgtctcgggatgtcgc
ctaatgtccacaatacgtcagactggtctgagtactgtatcctctcctgtgaataagtca
aatcacgattttaagcatgaacccatattaggtggcacctcattgctgcagtgggatgaa
tatggatataagctgtatgctattgaagaaggatcttctgagagaattattgcattctct
tttgggaaatgttgtcttaacagaggtgtttcaggctcaacatacgtccgtcaagttgta
tatggtgaagatcgattgcttgttgtgcagtctgaagttactgaagaacttaaacttttg
catattaaccttccagtttcatatatatcccaaaactggccaattctacatgtggcagct
agcaaagatggtatgttcttggctgttgctggccttcacgggttaatcatttatgacgta
agattaaataagtggcgattattcggagatattacccaagaacagaagatccagtgcaga
ggcttgttatggatgggaaaaattgttgttgtatgcaattatgacgactcctctaacacg
tatgaactactattttatccaagatatcacctggatcagagctccctactctatcagaaa
ccactgcttgcacaaccaatggttatggatgtataccaagactatttacttgtcacatac
agaccatttgatgtccatatattccatgtgaagatatccggtgaactgacaccttctagt
actgcttacttgcagctttctacagtacgggagttatcaatcatgactgcgaaaaaccat
ccttctgcaatgcgctttattcctgatcaacataaaagggattatataccaggaaagagc
atgtcatcttcattagatttatcagcaaaagaacctgttagatgtttgatattgaggacc
aatgggggactttctgtacttgatctgcatgatggacgggaaaaagatctcactgattca
attgaattgttttgggttacctgtggccagtcagatgaaaaaacaaatttaattggagaa
gtgtcatggttagattatggccatcgagggatgcaggtgtggtatccttcttcaggtctt
gagccctttcagcaggaagacttcttacagttggatcctgagctggaatttgatcgtgaa
gtgtatccacttggtctacttccaaatgctggtattgtagttggtgtttcacagaggatg
tcatttgcagcatgtacagagtttccatgttttgagccaactcctcaagctcaaacgatc
ttgcactgcttacttcggcaccttctccagaggaacaaaaatgaagaagccctacagtta
gcactattatcggctgagaagccacatttttgccattgtttggagtggcttctttttaca
gttttcgaggctgatatttcgaggcaaagtccaagcaaaaatcggcgcttaaacccagat
aattttagtagttgctctcttttggagaagacctgtgatctaataaagaaatttcccgag
tattttgatgttgttgttagcgtagcaaggaaaactgatggtcgacactgggctgatctt
ttttctgctgctggaaggtcaacagagttatttgaggaatgctttcaaagaagatggtac
cgtactgcagctggctacatacttgttatcgccaaacttgaaggtcctgctgtaagtcaa
tactgtgctttacgcctattacaggcaactcttgatgagtctttctatgaactcgcgggg
gagctggtgaggtttctcctgagatctggaagagagtatgatcctccagcatcagattca
gaaaaattgtctccgcgattcctgggctacttcagtgttccttcaagttttcgtaggcag
tctgttgagcctaaaagccccccttttaaagagcagaatgcacatgttgcttctgttaag
aatattcttgaaagtcatgctagttatctaatgtctgggaaggaactttccaagcttgtt
gcatttgtgaaaggcacccagtttgatcttgtggagtaccttcaacgagaaaggtacggg
agtgctcgtttggatgattttgcttcaggccttgaattaattggtcagaagcttcaaatg
ggaattctgcaaagccgcttggatgcagaatttcttttggctcatatgtgctcagtcaag
tttaaggagtggattgtggtgttggcaactctattgagaagatctgagattctttttgat
ttatttcagcatgatatgcgtttatggaaagcatacagcactactatccagtctcattca
gcattcaccgagtaccatgatttgcttgaagccctagaggagaaactctcgtcgacaaag
gaatcagaagaggagtag
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