Daucus carota (carrot): 108208758
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Entry
108208758 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108208758
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108208758
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108208758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-GeneID:
108208758
NCBI-ProteinID:
XP_017234771
UniProt:
A0AAF1ALQ4
LinkDB
All DBs
Position
2:39481322..39524166
Genome browser
AA seq
2487 aa
AA seq
DB search
MADKDTELLSRVVANHLFLGQFEPFRATLLTLRSRNPNLARSILQTIVSKAGRLDNLLFS
PSCPSPAHLTHLCTLELLQFNDPCLDVWSFGVDSLRLRAEFLLCVQIISSRVADSVKESV
SLGENVEGEGEDRVLAGNEEVFRVLERVLEVGVSRLRPSVVDEGDEGVGVEFEEEEFGCL
KKAVLENAEMFEALCDNVEKQVGLVESDELGLGRKVDGDFKVFRMIQRVVQVAHLDAMNE
CLNEGDEDGMIGHVRFLHLDHGVEESRYRMALQDLVKRVLLEKDEYGDAWLAIRRKLLSL
YAEALSSACTRLVQMIQIIQDDLLAEEIELYRASGSNQILPPIERLLNYISGLKSETGDT
TSSLKMATYSCMRDLYHYARVSGVHVLESVMNIALSAVKREQLQEASDVLSLFPRLQPLV
VVMGWDLLSGKTKLRKKLMQLLWTTKSQVLQLEESSQNGNSHKVSCVEHLCDFLCYQLDL
ATFVASVNSGQSWSLKSSLLLSRRELSQNEVDIHFDPFVENLVLERLSVGSPIRVLFDVV
PSIKYQDAIELISMQPITSNLAAWNRMQDVELMHMRYALESAVSALEVMGRSVADVKEIY
QVALCYLKDLRSHLEAIKITPRKILMINIIISLLHMDDLKATPLGASHSELPNTFSVDYA
DAESHGEGNEMVVSFTKLILKILQQNLPLAVAEQDSSLNANQRQGLEWRSLHAKRFIEDW
EWRLSILQCLLPLSERQWSWKEALTVLRAAPSKLLNLCMQRAKFDIGEETVHRFGLSPED
RATLELAEWVDGAFRRTSVEDAVSRAADGTSVGQDLDFSSLHSQLGPLAAILLCIDVAAS
SSKSADVSLKLLDQAQVMLSEIYPGGNPKRGSTYWDQIHEMAIISVVRRLLKHLHDLLEQ
DKPPVLRAVLSGEYILSSSQDLNRQGHRERALVMLHQMIDDAHMGKRQFLSGKLHNLARA
VADEENEKKSLKSEGSYNDMKAVLNHDKDGVLGLGLVVSKQSLPGLASGEIGTNSTGSET
KETGKRLFGPLNVKSSTYLSQFILHIAAIGDIVDGADTTHDFNYFSLVYEWPKDLLTRLV
FERGSTDAAGKVAEIMSADFVHEVISACVPPVYPPRSGHGWACIPVVPTSPNGYPERSLL
SPSSGEAKPNCYSRSSSIPGVSLYPLQLDVVKHLVKLSPVRAVLACVFGSSILYRDSDTT
ISSMNNNVLQTPDADRLFYEFALDQSERFPTLNRWIQMQSNLHRVSEYAVLAEQEIGEDV
DKSEATTSIKRFRENDGDSESEIDEIAVSDKSTLLPDIINKGNAVSDPLLDSLKPEGDKV
DTTVFLSFDGENEAPYERAVERLIDEENLMDALALSDRCLRNGASDHLLQLLIEHGENNP
SSSGESQGFASPGLWSSSWQYCLRLKDKQLAAKLALRYLHSWELDAALDVLTMCSCHLIE
SDPIKKEVVSMRQSLLRYKHILRVDNLHESWQEVEAECQEDPEGLALRLAGKGAVSAALE
VAESSGLSIDLRRELQGRQLVKLLTADPLNGGGPAEASRFLSSLRDTDDALPVAMGAMQL
LPNLRSKQLLVHFFLKRRDGKLSEVEVSRLNSWALGLRVLAALPLPWQQRCSSLHEHPHL
ILEVLLMRKQFQSASLILKEFPSLRDNSSLIAYAAKAIAVSISSPSREHRIPFSGARPKQ
KTRTGTPTKSSFTNGLSNLQKEARRAFSWTPRNTIDKTAPKDVYRKRKTSGLPQSERVAW
EAMTGIQEEGASLHSTDGQERPSVSIAEEWMLTGDPIKDEGVRSSHRYESAPDIILFKAL
LSLCSDETVSAKGAMELCINQMKNVLSSKQLPENASMEIIGRAYRATETFVQGLIFAKSQ
LRKISGSTDFVSNLERNRDIDDASSDAGSSSVGSQSTDELSEVLSQADVWLRRAELLQSL
LGSGIAVSLDDIADKGSSEHLRDRLVLDERYSMAVYTCRKCKIDIFPVWNAWGHALIRME
HYAQARVKFKQALQLHKGDPTPAILEIINTIEGGPPADVSSVRSMYEHLARSAPAILDDS
LSADSYLNVLYMPSTFPRSERSRRSQEAANDNTNYSSDFEDGPRSNLDSIRYAECVNYLQ
DYARQHLLSFMFKHGHFKDACFLFFPPNAVPSPPQPSSLGLVTSSSSPQRPDPLATDYGI
IDDLCDLCVAYGAMPVLEEVLSSRMSSAASEDVSVNQHTVAALARICTYCETHKHFNFLY
NFQVIKKDHVAAGLCCIQLFMNSSSQEEAIAHLEHAKMHFDEGLSARSKVGDSTKLVTKG
VRGKSASEKLSKLSEEGLVKFSARLAIQVDVVKSFHDADGSQWKHSLFGNPNDPETFRRR
CVIAEALVEKNFDLAFQVIYEFTLPAVDIYAGVAASLAERKKGGQLTEFFRNIKGTIEDD
EWDQVLGAAINVYANKHKERPDRLIDMLTSSHRKVLACVVCGRLKSAFQIASRSGSVADV
QYVAHQALHANALPVLDMCKQWLAQYM
NT seq
7464 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaagacacagagcttctctctcgagtcgtcgcaaaccacctcttcttaggc
caattcgaaccctttcgagccactctcttaactctccgatctcgaaaccctaacttagct
cgctctattctacaaactattgtttccaaagccggacgattagataacttgttgttctcg
ccttcctgtccttctccggctcatctgactcatctatgcactctcgaattactccaattc
aatgatccctgtttggatgtgtggagtttcggagttgattcgcttcggttgcgggccgag
tttttgctttgtgttcagattattagttctagagtagctgacagtgttaaggaaagtgtt
agtttgggtgagaatgttgaaggtgagggggaggatagggttttggcgggaaacgaggag
gtttttagggttttggagagggttttggaggtgggagtgagtaggttgaggccgagtgtg
gtggatgagggtgatgagggagtaggtgtggagtttgaggaagaggagtttggttgtttg
aagaaggctgtgttggagaatgcggagatgtttgaggcgttgtgtgataatgtggagaag
caggttgggttggtcgagagcgatgagttggggttagggaggaaggtggatggggatttt
aaggtgtttaggatgattcaaagggttgtgcaggtagcccatttggatgccatgaatgag
tgtttaaatgaaggtgacgaagatggaatgattggtcatgttcggtttcttcatttggat
catggagtggaggagtctagataccgcatggctttgcaagatctggtcaagagggttttg
ttggaaaaggatgaatatggagacgcctggctggccatcaggcgtaaactgttatcactc
tatgcggaagctctgtcttcagcctgcacacgtcttgttcaaatgattcagattattcaa
gatgatcttctagctgaagagattgaactttacagagcttctggcagcaatcagatatta
cctccaattgagcgtttgctgaattacatttctggactaaaatcagagacaggtgacacg
acgtcatctttgaagatggcaacttactcgtgcatgagagacttgtatcattatgctcgt
gtttctggcgttcatgtattagagtctgtcatgaatattgccctgtctgctgtcaagagg
gagcaacttcaagaagcgagtgatgttctctcactgtttccgcgacttcaacccctagta
gttgtcatgggttgggatctgttgtccggcaaaaccaaattaagaaagaagctaatgcag
cttctatggacgaccaaatcacaggttctccagctggaagagtcttcccaaaatggtaat
tcacacaaggtatcttgtgttgagcatctttgtgattttctatgttatcaactggacctt
gctacttttgttgcttccgtcaattctggccaatcgtggagtttgaagtcctcgttgttg
ttgtcgagaagagaactttcacagaatgaagttgatatccatttcgatccgtttgttgaa
aatttggttctggaaagattgtctgtgggaagtcctattcgggttctgtttgatgtagtg
ccaagcataaaatatcaagatgctattgaattaattagcatgcagccgatcacctccaat
ctagcagcctggaacaggatgcaagatgttgaattgatgcacatgcgttatgcactggaa
tctgctgttagtgcactggaagtcatgggcagaagtgtggctgatgtgaaagaaatctac
caagtggcgttgtgctatttaaaagacctgagaagccacctggaggccatcaaaattacc
cctcgcaagatattgatgatcaatattattatatccctcctccatatggatgatctgaaa
gcaacacctcttggggcaagccattcagaattacctaatacatttagcgttgactatgct
gacgctgaaagtcacggagaaggaaacgagatggttgtatctttcacaaagttgatactt
aaaatattgcagcagaatctacctttggccgtagctgaacaggatagttcactgaatgct
aatcaaagacaaggcttggagtggagaagcctacatgctaaacgttttattgaagattgg
gaatggcgtttgtcaatcttacagtgtcttctaccattatctgaacgccaatggagctgg
aaggaagcgttaactgtattacgtgcagccccatcaaagctacttaatctttgcatgcaa
agggctaaatttgacattggagaagaaactgtacatcgttttggattatcaccagaagat
agagcaacacttgaattggctgaatgggtggacggtgcatttagacgaacatctgtggaa
gatgctgtgtcacgtgctgctgatggaacctctgttggtcaagatttggatttttcctct
cttcattcccaattaggtcctctggcagcaattttgctgtgcattgatgttgctgcatct
tcttcaaaatctgcagatgtgtctttgaagcttctagaccaggctcaggttatgttatct
gagatctatccaggtggtaatccaaagagagggtcaacctattgggatcagattcatgaa
atggctataatttctgttgtgagacgtcttttgaagcaccttcatgatttgttggaacag
gataaaccaccagttcttcgggctgtcttgtctggggagtatatcctatcttcatcacag
gatttgaaccgacaaggacacagggaacgtgctcttgttatgctacatcaaatgattgat
gatgctcatatgggaaaacgacagtttctgagtggtaagcttcacaatcttgctagagcc
gttgcagacgaagaaaacgaaaaaaaatctttaaaatcggagggatcgtataatgacatg
aaggctgtcttaaatcatgacaaggatggggtccttggattggggttagtagtctccaag
caatcattgcctggtttggcatctggagaaattggtacaaattcaactggatctgaaact
aaagagaccggaaagagattgtttggtcctttgaatgtgaagtcttctacatatctctcc
caatttatcctccatattgctgccattggtgacatagtggatggggcagatacaactcat
gattttaactacttctctcttgtgtacgagtggcccaaagatcttttaactcgtctggta
ttcgagaggggtagcacagatgcagctggaaaggtagcagaaattatgtctgctgatttt
gtccatgaagtaatttctgcatgtgtacctccagtatatcctcctcgatctggtcatgga
tgggcatgtatcccagtagttcccacaagtccaaatggctaccctgaacgttcattactt
tccccttcatctggagaagctaagccaaattgttacagccgttcttcgtccataccagga
gtttctctgtaccctcttcagttggatgtagtgaagcaccttgtcaagttatcaccagtg
agggctgtcttggcatgtgttttcggaagtagtatattataccgcgatagtgacaccact
attagttccatgaacaataatgttctgcagacacctgatgctgacaggttattctatgaa
tttgctcttgaccagtcagaaagatttccgactttgaaccgctggatacaaatgcagagt
aacctccatcgagtgtcagaatatgctgtactggctgagcaggaaattggggaagatgta
gataaaagtgaagcaacaacttctattaagcgattccgcgagaatgatggtgattctgaa
tcagaaattgatgagatagctgttagtgataaatctacactgctgccagacattataaat
aaaggaaatgctgtttctgatcctttgctcgactcgctcaagccagaaggggacaaagtt
gatacaacagttttcctttccttcgacggggaaaatgaagcgccctatgaaagagctgtt
gagagattaatcgatgaagaaaacttaatggatgctcttgctctttcggatcgttgccta
agaaatggagcttcagatcatttacttcagctacttattgaacacggtgagaacaatccg
tcatcatctggagagtctcaaggttttgctagtcctgggttatggagcagtagttggcaa
tattgtttgcgtttaaaggataaacaactcgctgctaaacttgccctcagatatctgcac
agctgggagctggatgctgctttggatgttcttactatgtgcagttgccacttgattgaa
agtgatcctattaagaaagaggttgtttcaatgcggcaatcgttgctgagatacaaacat
atattacgcgttgacaatctacatgagagttggcaagaggttgaggcagagtgtcaggaa
gatcctgaaggtcttgctcttagactggctggaaaaggagctgtctcagcagctttagag
gtagctgaaagttcaggactatcgatcgatttaaggagggagctgcagggtcgtcagctt
gtaaaacttcttacagcagatccgcttaatggtggcggtccagcagaagcttcacgcttt
ctttcgtccttgcgtgatactgatgatgctttaccagttgcgatgggcgcaatgcagctt
ttgcccaatttgagatctaagcagcttctcgttcactttttcttgaagagaagggatggt
aaattgtcagaagttgaagtttctagactcaactcttgggcattaggtcttcgtgtgttg
gctgctttgccattaccatggcagcaaaggtgctcttccctccatgagcaccctcattta
attctggaggttcttttgatgcggaaacaatttcagtcggcctcactgatacttaaagaa
tttccttcgttgagagataatagcagcctgattgcttatgctgcgaaagctatagctgtc
agtatatcctctccatcccgagagcataggatacctttttcaggagcaagaccaaaacag
aagacgagaacaggcacacccacaaaatcgtcttttactaatggcttaagtaacttgcaa
aaagaggcgcgacgagcattttcttggacaccgcgtaatactattgataaaactgctcca
aaagatgtttatagaaaaagaaaaacctctggattaccacaatctgaaagagttgcttgg
gaggcaatgactggtatccaggaagaaggtgcttcattacactctactgatggtcaagaa
cgaccttctgtctctatcgccgaggagtggatgctaaccggtgatcctataaaggatgaa
ggagttcgttcttctcatcgatatgaaagtgcccctgacatcattctcttcaaggcactg
ctttctttgtgttcggatgaaactgtatcagccaaaggtgctatggagttgtgcattaat
cagatgaaaaatgtcttgagctccaagcaattgccagagaatgcatcaatggaaatcatt
ggtcgagcttatcgtgctactgagacatttgttcagggacttattttcgcaaaatctcag
ctcaggaaaatatctgggagtactgactttgtaagtaacttggaaagaaatagggatatt
gatgatgcatcttctgatgccggcagctctagtgtgggcagtcagtcaactgatgaactt
tctgaagttttgtcacaagcagatgtgtggttaagacgtgctgagctccttcaaagcctt
ctaggatctggaatagctgtctcccttgatgatattgctgataaggggtcttctgaacat
ttaagggaccggctggttttagatgaacgatacagcatggctgtatatacttgcaggaag
tgtaagatcgatatattccctgtttggaatgcttggggtcatgctttgattcggatggaa
cactatgcacaagcacgcgttaaattcaagcaagcacttcaattgcataaaggtgatcct
acacctgcgattctggagatcattaatacaattgaaggaggtccaccagctgacgtttct
tctgtgcgttccatgtatgaacatttggctagaagcgcaccagcaatattggatgattct
ctttctgccgattcttatctaaatgttttgtacatgccatcaacctttcctcgttcggaa
agatccaggagatcccaagaagctgcaaatgataatacgaattacagttcagattttgaa
gatggacctcgtagtaacttagacagcattagatatgccgaatgtgttaactatctacag
gattatgcacgacagcatttgcttagctttatgttcaaacatgggcacttcaaagatgct
tgcttcttgttctttcctccgaatgctgttccttctcctccccaaccatcatcacttggc
ttggttacttcatcatcttcccctcagagaccagaccctttggctactgattatggaatt
attgatgacttgtgtgatttgtgtgttgcttatggtgcaatgcctgttttggaagaagta
ttgtcatcaagaatgtcttcagcggcatcagaagatgtgtctgtgaatcagcatacagtg
gccgcacttgctcgcatctgtacctattgtgaaactcataagcattttaattttctatac
aatttccaggttatcaagaaggaccatgtggctgctgggctttgctgcattcagttattt
atgaactcttcttctcaagaggaagctatagcacacttggaacatgccaagatgcatttt
gatgaaggtttgtctgcacgatcaaaagtaggagactccacaaaacttgtgaccaaaggc
gtccgtggcaaaagtgcatcagaaaagctctctaagctctctgaggaaggacttgtcaag
ttctctgctcgcttagccatacaggtggatgttgtaaaatcatttcatgatgcagatgga
tcacagtggaagcactctttatttggaaatccaaatgacccagaaactttcaggagaagg
tgtgtaattgctgaggcattggtggagaagaatttcgacctggccttccaagtgatatat
gagttcactcttcctgctgttgatatctatgctggagtggctgcatcacttgccgagcgg
aaaaagggagggcaactgacagaatttttcagaaacattaaaggcacaattgaagatgat
gaatgggaccaggttttaggggcagcaattaatgtctacgctaataaacataaggaacga
ccagatcgcctcattgacatgttgactagtagtcacaggaaggtgttggcttgtgttgtc
tgtggccgtcttaagagtgccttccagattgcttctcgaagtggaagtgtggcagacgtt
caatatgttgcacatcaggcattgcatgcaaatgctcttcctgttcttgatatgtgcaag
cagtggttagctcagtacatgtaa
DBGET
integrated database retrieval system
