Daucus carota (carrot): 108208769
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Entry
108208769 CDS
T05350
Name
(RefSeq) endoribonuclease Dicer homolog 2
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dcr03036
]
108208769
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108208769
microRNA pathway
RISC loading complex
108208769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
DEAD
Helicase_C
Dicer_dimer
ResIII
PAZ
dsrm
SNF2-rel_dom
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
108208769
NCBI-ProteinID:
XP_063942947
LinkDB
All DBs
Position
2:38000690..38012196
Genome browser
AA seq
1434 aa
AA seq
DB search
MAILVENTDDSIQKEVVDMPVVENAEEVSADHLPFARSYQLDAVEMAMQQNTIVFLETGA
GKTLIAIMLLRIYAHHLRKPSTSLGVFLVPTVVLVSQQAEVVQMHTDLKVGKYWGEMGMD
FRNAEDWKKRQDDCEVLVMTPQILLNALRHGFIKLETIRILIFDECHHARGRHPYACIMT
EFYHRQVESNNLQLPRILGMTASLINTRGSSEETGYWKQISELENLMHSKVFTCSSDSEM
AEYIATSTPKLKIYRHVDIPRTLSENIAMELKTLKEKFQCDIEKANLEEFQKENTRQRLS
KLCSTVSFCLRELGLWLAIKAADSLSSPESEMVVWEKLHKSGERILTDFCSDVCKVLSGY
MPSDPNWSIRDDMEANVLDGYLSTKVICLFESLLERRELEDLRCIVFVKRVITANVLCRL
LNVLLPDLTGWKTEYMAGNNTPLQLQSRKAQNKIVEEFRKGTVNIIVATSILEEGLDVQS
CNLVVRFDLSATVCSFIQSRGRARMQNSEFLLLVKSGDKTSLARVDNYLASAQVMRQESL
RHVTVPCQPLDTKIYNEVFYRVDSTGAIVTLSSSVSLIYFYCSRLPSDGYFKPFPRCKID
KELGTCTLYLPKSCPLPSVTVSGNAKTLKQLACLEACKKLHIIGALSDNLVPDLVEVKDA
EEMGHLEVHDEHDSYVPSELVGQVLQNGVKTYHCYVLQLERSFSYDIKMDHLILAASNEL
NFDDGKNIAFELEVDRGSLTVHIKYAGTISLTSKQVHVCQQFQVKVFKFLYNKKKILDVF
HPWNDLTVYDYLLLPTTGSLQSLHIDWKCVYSVLFKSKNICHDNTSCPLPKDQYNILHTR
DGLVCRCVLENSLVCTPHNGYIYCILGTLDDTTGSSVLKLKDGESISYKNYYDKRHGIEL
RFEREHFLKGRHIFPVQKHLHKFKRQKEQVVEQSNATVKLPPELCSIIMSPISAGTFYTF
SFAPAIMHRIESLLIASSLKKMHADYCNQNAIATTKIPTTKVLEAITTKKCLESFDLESL
ETLGDSFLKYAACQQVFKMHQDKHEGILSIKKNKIISNANLCKLGCSRKLPGLIRNEPFD
PKLWIIPGDQMEAFHEVQLCSATNVFTKGVRKIKSKVVADVVEALIGLFLSSGGEIAALS
FMNWIGIEVDFSNIPYNRSFSAHPEELLNVSSLQSILKYSFSDASLLVEALTHGSFMLPQ
VPQCYQRLEFLGDSVLDYMITMHLYNKYPGMSPGLLTDLRSASVNNDCYSLCAIKAGLQK
HILHASQKLHRQIESSVQNLDPLLMGATFGWESENSLPKVLGDVIESLAGAILVDSGYKK
DIVFESIRPLLEPLVSPETIKFQPVRELQQLCQKENYALKKPVVSTDNGAATVTVEVEAN
GVIHKESCSGPNKAEAKKLASKAVLRLLKESMSSKLHPPPYLSSPKRKRRKEEE
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggctatcttggtggagaacactgatgattctattcagaaagaggttgttgatatgcct
gtggttgagaatgctgaagaagtgtctgcagatcaccttccttttgctaggagctatcaa
ctggatgcagtggaaatggcaatgcaacagaataccattgtgtttttggagacgggtgcg
gggaaaaccctgattgctatcatgcttctccgcatatatgctcaccatttgcgaaaaccc
tccacttcccttggtgtttttctggttcccactgtggttctggtttcacaacaagctgag
gttgtgcaaatgcataccgacttaaaagtgggaaagtattggggagaaatgggaatggat
tttaggaatgctgaagattggaagaagcgacaggacgattgcgaggtgcttgtgatgaca
ccacaaatattgcttaatgccttgaggcacggttttataaagcttgagacgataaggatt
ctaatattcgatgaatgccatcatgctagaggcagacacccctatgcttgcattatgaca
gaattttatcaccgtcaagtggaatctaataacttgcagcttcctaggatattggggatg
accgcttcccttatcaacactagaggttcaagtgaggaaactggttactggaagcaaatc
agcgaacttgagaatctaatgcattcaaaggtattcacctgcagtagcgactctgagatg
gcagagtatattgcaacgtcaactccgaagctcaagatttatagacatgtggatattccg
cgcacgttatcagaaaatatagctatggagttgaagactttaaaagagaagttccaatgt
gacattgaaaaagcaaacctggaggagtttcaaaaggaaaatacaaggcagaggttatct
aaactatgttcaaccgtctccttttgcttgagggaactcggactttggttggccataaag
gcggcagattctttatcatctccagaaagcgagatggtggtatgggaaaaactgcataag
tctggggagaggatattaacagatttctgctccgatgtatgcaaagttctttctggttat
atgccttctgatcctaactggtctataagggatgatatggaggccaatgtgttagatggt
tatctttcaacgaaagttatctgtctctttgaatctcttctcgaacgcagggaattagaa
gacttgagatgtatagtctttgtaaaaagggttataacggcaaatgtactttgtcgcctt
ttgaatgttttgcttcctgaccttactggatggaaaacagaatatatggcaggcaataat
actccacttcagttgcagagtaggaaggcccaaaataaaattgttgaagaatttcgcaag
gggacggtgaacattattgttgcaacatcaattcttgaagaagggttggatgtacagagc
tgcaatctggttgtaaggtttgacctatcagctacagtgtgcagttttattcagtcccga
ggtcgggctaggatgcagaactcagagtttctgctattggttaaaagtggggataaaact
tcgcttgctagggtagacaactaccttgctagtgcacaagtgatgaggcaggaatccttg
cgccatgttacagtgccttgtcaaccacttgatactaaaatttataatgaagtgttctac
cgagttgactccacaggtgctattgtaacactgagttccagcgtgtctctgatctacttc
tattgctctcgcctaccttctgacggatactttaaaccctttccgagatgtaagattgac
aaggagttgggaacatgcaccttatatctccctaaaagttgcccattacctagtgttacc
gtttctgggaatgcaaaaacactgaaacaacttgcatgcctggaagcatgcaaaaagttg
catataattggagcgttatcggacaatcttgtaccagatttggtggaagtaaaagatgct
gaggaaatgggtcacctggaagtacacgatgaacatgatagctatgttccatcagaactt
gttggtcaagttctacagaatggtgtgaaaacatatcactgctacgtgctgcagttggaa
agaagttttagctatgatattaaaatggatcatctaatacttgctgctagtaatgagctt
aattttgatgatggcaaaaacatcgcatttgaattggaggttgataggggaagtttgaca
gttcacatcaaatacgctggaactataagtctcacatctaaacaggttcacgtgtgccag
cagtttcaagtaaaagttttcaaatttctctataacaaaaagaagatccttgatgttttt
cacccgtggaacgacctcactgtttatgactatctcctgctaccaactactggctcactg
cagtcacttcatattgactggaaatgtgtctattcggtcctgttcaaaagcaaaaatatc
tgccatgataacacaagttgccccttgcccaaagaccaatataatattctgcacacaagg
gatggtctggtctgcaggtgtgttctagaaaattctttggtatgcacacctcacaatggt
tatatatactgcattctgggcacattagacgatacgactggaagttcagtgttgaaatta
aaagacggagaatctatatcttacaaaaactactacgacaaaaggcatggcattgaattg
cgatttgagcgagaacattttcttaaaggaagacatatttttccggtacagaaacacctt
cataagtttaaaaggcagaaggaacaagttgtagaacaaagcaatgcaactgtgaaattg
cctcctgaactttgttccattatcatgtcacctatttctgccggcaccttttatacgttt
tcttttgccccagcaatcatgcatcgaatagaatctttgctcattgctagcagcttgaaa
aagatgcatgcagattactgtaaccaaaatgcaattgctacaactaagattccaaccacg
aaggtgttggaagctattactactaagaagtgccttgagagttttgatttggagtcactg
gagactctaggagattcttttcttaaatacgctgcttgtcagcaggtgtttaaaatgcac
caagataaacatgaaggcattcttagtataaagaaaaataaaattatatctaatgctaac
ctatgcaagctcgggtgcagccgtaaactcccgggtttgatacgtaatgaaccctttgat
cccaaactgtggatcattcctggtgatcaaatggaggcttttcatgaagttcaactatgc
agtgcaaccaatgtattcaccaaaggagtacgtaaaattaaaagtaaggttgtagctgat
gttgttgaggcattgattggtctatttctcagcagtggcggtgaaatcgcagcgttgtca
ttcatgaattggattggcattgaggttgatttttccaatataccatataataggagcttt
tcagcacatccagaagagcttcttaatgttagctctcttcagtccatacttaagtactcg
tttagtgatgcttcactacttgttgaagcattaacgcacggttctttcatgctaccccaa
gttcctcagtgttatcagcgtctagagtttcttggagattctgtactggattatatgata
accatgcatctgtacaataaatacccaggaatgtcacctggattgctaactgatctgaga
tcagcttctgtaaacaatgattgttactctttatgtgcgattaaggccggattgcagaag
cacattcttcatgcttctcaaaaacttcacaggcaaatagagtcctctgttcagaattta
gatccattattaatgggagcaacatttggatgggagtcagaaaattctcttcccaaggtt
cttggagatgtaattgaatctctagctggggcaatattagttgattctggatataaaaaa
gatattgtattcgagagcataaggccgcttttggaacccttggtttctcctgagacgatc
aagtttcaacccgtgagagaattgcaacagttgtgccaaaaagagaattacgcgttaaaa
aagcctgttgtgtcaactgacaatggtgcggcaactgttacagttgaggttgaagccaat
ggcgtcatacacaaagagtcatgcagtggtccaaataaggcagaagccaagaaacttgct
tcaaaagctgttttgaggttgttaaaggagagcatgtccagcaaactacaccctcctcct
tatctttcatctcccaagcgtaaaaggcgaaaggaagaggagtga
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integrated database retrieval system
