Daucus carota (carrot): 108208791
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Entry
108208791 CDS
T05350
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108208791
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcr01009
]
108208791
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108208791
03036 Chromosome and associated proteins [BR:
dcr03036
]
108208791
Protein phosphatases and associated proteins [BR:
dcr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108208791
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108208791
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108208791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
108208791
NCBI-ProteinID:
XP_017234807
UniProt:
A0A166DMF2
LinkDB
All DBs
Position
2:39612655..39615882
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AA seq
487 aa
AA seq
DB search
MWKQLFKRLPRKSLKSESTGSPSNGTAPLGQRSGNAGTGRANATKRTSSAVFPAGVMSGI
EPLLPFKDVPNSEKMNLFISKLSLCCVVFDFTDPTKSVNEKDLKRVTLIELQEFLSTGAP
KYTEPAILAMCKMCAVNLFRVFPPHYRSNTRSGENDDDEPTFDPSWSHLQLVYDILLKFV
SCPSVEPKVAKKYINHSFILGLLDLLESEDPRERECLKGIMHKIYGKFMVHRPFIRKNIS
NVFSRFVNETDRCNGIAELLEIYGSVITGFALPLKEEHKIFLRMGIIPLHKPRALGAYFQ
QLSYCVMQFIEKEPKLASTVITGLLKYWPITNSQKEVLFLSEIEEILEIIKMDEFQKVMA
LLFRRIGCCISSSHFQVAERTLFLWNNEHIVNLIAHNRRVILPLIFPALENNVHSHWNHS
VLNLTLNVRTIFSEMDDELFLDCHSQFMEEQFKLTRETEKRKEAWKHLENAASRQPIAGN
TAVLVNP
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagcaactttttaaaagacttcctaggaagtcactgaaatctgaatccactggc
tctccgagtaatgggactgctccattaggccaaagaagtggaaatgcgggcacgggccga
gcaaacgccactaaaaggacatcatcagcggtttttccagctggtgtcatgtctggaatt
gagccccttttgcctttcaaagatgttcccaattcagaaaagatgaatctctttatcagt
aagttaagtctgtgctgtgtggtgtttgatttcactgatccaactaagagtgttaatgag
aaagatcttaaacgtgttacgttgattgagcttcaagaatttttgtctaccggggcacca
aaatatactgaaccagcaatccttgcaatgtgcaaaatgtgtgctgttaacttgtttcga
gtctttccaccacattatcgatctaacacgcgtagtggtgaaaatgatgatgatgaacct
acatttgatccttcttggtcacatctacaacttgtgtatgatatattgctcaaatttgta
agttgtccctctgtggagcctaaggtcgcaaaaaagtatataaatcattcatttatttta
ggattgctcgatctccttgagtctgaggatccacgagaaagagaatgtttgaaaggtatc
atgcacaaaatttacggcaagtttatggtgcaccgaccttttattcgtaagaacattagc
aatgtcttctctcgctttgtaaatgaaactgatcggtgcaatggaattgctgagttatta
gagatatatggcagtgtgattactggatttgcattacctttgaaggaggagcacaagatc
tttctgcggatgggaataattcctctgcacaagccaagggctttaggggcttactttcaa
cagttgtcatattgtgtaatgcaattcatagaaaaggagccaaagttggccagcacggtg
atcacagggttgttgaaatactggccaatcaccaatagccagaaggaagttctgtttttg
agtgagatagaagagattcttgaaataattaaaatggatgagtttcagaaggttatggct
ttattatttcggcgaattggatgctgcatcagcagttcacattttcaggtggctgagaga
acactgttcctctggaataacgaacatattgtgaacctaattgcacataacagacgtgtg
atcttgccactcatatttccagccctagaaaacaatgtgcatagccactggaaccattct
gttctcaacttaactctcaacgtgagaacaattttctcggagatggatgatgagctgttt
ttagactgtcattctcagttcatggaggaacaatttaaactaacacgagagacagaaaag
cggaaagaagcatggaagcaccttgagaatgcagctagtcggcaaccaatagctggaaac
acagccgtcttagtgaacccgtag
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