Daucus carota (carrot): 108208823
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Entry
108208823 CDS
T05350
Name
(RefSeq) pleiotropic drug resistance protein 1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
dcr
Daucus carota (carrot)
Pathway
dcr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108208823
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcr02000
]
108208823
Transporters [BR:
dcr02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
108208823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA
ABC2_membrane_3
AAA_28
AAA_25
nSTAND3
RsgA_GTPase
DO-GTPase2
DnaB_C
Motif
Other DBs
NCBI-GeneID:
108208823
NCBI-ProteinID:
XP_017234869
UniProt:
A0AAF0WJ28
LinkDB
All DBs
Position
2:50639028..50646604
Genome browser
AA seq
1438 aa
AA seq
DB search
MDGSNLYNLSNSVRNSRNSRSTRERAGSLRSSSSAIWRSSGMEVFSKSARDEDDEEALKW
ASLEKLPTFDRLRKGLLLGSQGAGASEIDIDNLGTEERKKILERLVNVAEEDNEKFLLKL
RDRVDRVGIDLPLIEVRFENLKIDAEAHVGSRALPSFLNFNISIVEGLLDTLHLLPNRKQ
RLTILDDVSGILRPCRMTLLLGPPSSGKTTLLLALAGKLDPTLKFSGRVTYNGHEMTEFV
PKRTAAYISQHDLHIGEMTVRETLAFSARCQGVGSRYEMLAELSRREKDANIKPDPDVDI
YMKAAATEGQEASVVTDYVLKVLGLDVCADTMVGDQMIRGISGGQRKRVTTGEMLVGPSK
ALFMDEISTGLDSSTTYQIVKALRHSVHILQGTALISLLQPAPETYDLFDDIILISDGQI
VYQGPRENVLEFFESMGFKCPERKGVADFLQEVTSKKDQKQYWLRKDEPYRFITAIEFSE
AYQSFHVGRRLGEDLATPYDKNKSHPAALTTDKYGVGKTELLKAVTAREILLMKRNSFVY
VFKVFQLTTMAIITMTLFLRTELHQNSVTDGGIYMGALFFGVVMLMFNGLAELAMTIAKL
PVFYKQRDLLFYPTWSYSLPVWIIKIPITFIEVAVWVVLTYYVIGFDPNVGRFVKQYIVL
LLINQMASALFRLMAALGRNMILAFTFGGFALLVLFALGGFVLARDDVAKWWLWGYYSSP
MMYGMNAIAVNEFLGHQWHKLVEDGSETIGVAILKSRGFFPYAYWYWIGVGALIGFVLLL
NFAVAIALTYLDPLGKPQAVIPDKDSAEAIELASRGGTSAEANENKKKGMILPFEPHSIT
FDEVMYSVDMPPEMKEQGVVEDKLLLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGR
KTGGYIEGNITISGFPKKQETFARIAGYCEQNDIHSPHVTVYESLIYSAWLRLPSEVDST
TRKMFVDEVLELVELNTMKAGLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSG
LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPVGRHS
CELIKYFEGINGVNKIKDGYNPATWMLEVTSSAQEMVLGVDFTDVYHNSDLYRRNKALIQ
ENSSPRPGAKDLYFPSQYSQSFITQCMACLWKQRCSYWRNTSYTAVRFLFATAIAVMLGS
MFWDLGSKLRSRQDLFNAMGSMYAACLFLGVQNASSVQPVVDVERTVFYRERAAGMYSAL
PYAFAQVLVEIPYVLAQAGVYSIIVYAMIGFDWTVVKFFWYVFFTFFTLLYFTLFGMMTV
AVTPNADIAAIIAAAFFALWNVFSGFIIPRPKMPVWWRWYSWVCPVAWTLYGLIASQFGD
RDDKTLSDVKVTVKKFVEDYFGFEHHNVWVAGAAVAGFTVLFAYTFAYSIKSFNFQRR
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggacggtagtaatctttacaacttgagtaacagtgtgaggaacagcaggaacagcagg
agtactagagagagagcagggagtttgagatcaagcagttctgcaatatggaggagcagt
gggatggaagtgttttcaaagtctgcaagagatgaagatgatgaagaggctttgaagtgg
gcttctcttgagaagctgcctacttttgataggttgagaaaaggcttgcttcttggttct
caaggggctggggccagtgagattgatattgataatcttggaactgaagagaggaagaag
attctggagaggcttgttaatgttgctgaagaagataatgagaagttcttgttgaagctc
agggatcgagttgacagggttggaattgatttgccactcatagaagtgagatttgagaat
ttgaaaattgatgcagaagctcatgttggaagcagggctttgccttcttttctcaacttc
aatattagtatagtggaggggttgttggatactcttcatttactaccaaacagaaagcag
cggttaactatacttgatgatgttagcggaatcctcaggccttgcaggatgacattgctt
ctaggtccgccaagttccggaaagaccacattattgctggctttggctgggaagcttgat
cctaccttaaaattttctggaagggtgacttacaatggccacgaaatgactgaatttgtg
cctaagagaacggctgcctatatcagccaacatgatctccatataggagaaatgactgtc
agagaaactttggcattttctgcaagatgccagggggttggatcacgctatgaaatgttg
gcagaactgtcaagaagagagaaagatgcaaacatcaaaccagatcctgatgtcgatatc
tacatgaaggctgctgcaacggaaggtcaagaggccagtgttgtcacagattatgttttg
aaggttttgggacttgacgtgtgtgctgacactatggttggagaccaaatgattagggga
atatctggaggacaaagaaagcgtgttacgacaggtgagatgttggttggaccatcaaag
gcactttttatggatgagatatccactggtttggacagttctaccacttatcaaatcgtg
aaagcactccgccacagcgtccacattctccaaggaactgctctcatttccctcctgcag
cccgcccctgaaacatatgatttgtttgatgatattattctcatatctgatggccagatt
gtgtatcaaggtcctcgtgaaaatgtactggagtttttcgaatccatgggcttcaaatgt
ccagaaagaaaaggtgtggcagacttcctgcaagaggttacatcaaagaaagatcagaaa
cagtattggctacgcaaagacgagccgtacagatttatcacagccatagaattctctgag
gcttaccaatcattccatgttgggcgtcgattaggagaagatcttgcaacaccatatgac
aagaacaaaagtcatccagctgctttgacaactgataagtatggagttggtaagacagaa
ctcttgaaagctgttactgcgagggagattttgcttatgaagaggaactcattcgtatac
gtattcaaagtgttccaacttacaacaatggccattattaccatgacactgttcctaaga
actgagttgcaccaaaattcggtcactgatggagggatatatatgggcgccctatttttt
ggtgtggttatgcttatgtttaatggattagcagagcttgcaatgacaatagcgaagctt
ccagtcttttacaagcaaagggatcttctcttctatccaacatggtcatattctcttcca
gtgtggatcatcaagatccccatcacatttatagaagttgctgtttgggttgtcctcaca
tattatgttattggatttgatccaaatgttggaaggtttgttaagcagtacatagtactt
ctactcatcaaccagatggcttctgcactatttcgacttatggcagcactgggaaggaac
atgattcttgcgttcacatttggaggtttcgcgttgcttgtactttttgcattaggtggc
tttgtattagcacgagacgacgtagcaaagtggtggttatggggttattattcatcaccc
atgatgtatgggatgaacgcaattgctgttaatgaattccttgggcatcaatggcacaaa
ctagttgaagatggatctgagaccataggagttgcaattttaaagtcgcgaggtttcttc
ccatatgcttactggtattggattggtgttggggcattgattggcttcgttttgcttctc
aactttgcagtcgcaatagcacttacgtatcttgaccctctggggaagcctcaagctgtt
ataccagacaaagattctgcagaagccattgagttggcatcccgaggaggaaccagtgca
gaggccaatgagaacaagaaaaaagggatgattcttccctttgaaccacattccataaca
tttgatgaggttatgtactccgttgacatgccaccggaaatgaaagagcaaggcgttgtt
gaagataaattgttgcttctgaagggtgtgagtggagcgtttaggccaggtgttctcact
gctctaatgggtgtcagtggtgctggtaaaactactttgatggatgtgcttgcaggtcga
aaaactggcggttacattgagggtaacattacaatatccggttttccaaagaagcaggaa
acttttgcacggatagctggatattgtgagcagaatgatatccactcacctcatgttact
gtctatgagtcactaatatactcagcttggttgcggttgccttcagaagttgattcaaca
accagaaagatgtttgttgatgaggtcctagaacttgttgaattgaacacaatgaaggcg
ggattagtcgggttgccaggcgtaaatgggctctcaactgaacagcgaaagcgtctgaca
attgcagttgagctggtggcaaacccctccataatattcatggatgagcctacttcaggt
ttagatgcacgagctgctgcaattgtgatgagaacagtgaggaatactgtggacacagga
agaacagttgtttgcaccattcatcagcctagcatagacatttttgaagcttttgatgag
cttttcctaatgaaacgcggagggcaagaaatatatgtgggaccagttggtcgtcattct
tgtgaactaatcaagtactttgagggcatcaatggagtaaataaaataaaagatggatat
aatccagcaacgtggatgttggaagttacttcttctgcgcaagaaatggttctaggagtt
gatttcaccgatgtctaccataattcagatctttacaggagaaacaaggcgctcattcaa
gaaaatagttcacctcgtccaggtgcaaaggatctctatttcccctctcaatactcgcaa
tctttcatcacccaatgcatggcttgcctatggaaacaaagatgctcatactggcgaaac
acatcttatactgctgttcgtttcctctttgctactgctatagcagtgatgcttggctca
atgttctgggatcttggttccaaactgcgatcacgacaggatctcttcaatgctatgggt
tcaatgtatgccgcttgcctcttcttaggggtccaaaatgcttcgtcagtgcagccagtg
gtggatgttgaacgaacggtcttttatagagaaagagcagcaggaatgtactcggccttg
ccatatgcatttgcacaggtattggtagaaataccatatgttcttgcacaagctggagtg
tatagtattatcgtttatgcaatgatcggattcgattggacagtagtgaaattcttttgg
tatgtattcttcacgttcttcaccctgctatacttcactctttttggaatgatgactgtc
gcggtgactcccaatgccgacattgctgcaatcattgctgctgcattttttgcattatgg
aacgtcttttcaggatttattatccctcggcctaaaatgccggtctggtggagatggtat
tcatgggtatgtccagttgcttggaccttgtacggattgatagcatcacagttcggagat
agagacgacaagacactttctgatgtaaaagtaactgttaaaaagtttgtcgaggactat
tttggatttgaacaccacaacgtatgggtagctggggctgccgtagctggctttaccgtt
ctttttgcatacacatttgcctattccattaaatcattcaacttccaaaggcggtaa
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integrated database retrieval system
