Daucus carota (carrot): 108208892
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Entry
108208892 CDS
T05350
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial isoform X1
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dcr03032
]
108208892
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108208892
Enzymes [BR:
dcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
108208892
DNA replication proteins [BR:
dcr03032
]
Prokaryotic type
DNA Topoisomerases
108208892
DNA repair and recombination proteins [BR:
dcr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
108208892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-GeneID:
108208892
NCBI-ProteinID:
XP_017234968
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All DBs
Position
2:43019945..43036112
Genome browser
AA seq
922 aa
AA seq
DB search
MAPFCTALLRCTPLPSPATRLSFLRFNSPGIRYLSSLRRAKPVRPITAKQVDIDGETRDE
GNGSVLVRDDGVRDGRIVPMELHREASEAYMSYAMSVLLGRALPDVRDGLKPVHRRILFA
MHELGLSSRKPYKKCARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSLRSPLIRGHGNFGS
MDADPPAAMRYTECRLEALTEAMLLADLEQDTVDFIPNFDNSQKEPSVLPARVPNLLLNG
SSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQEFLEYMPGPDFPTGGLIMGNHGIL
EAYRTGRGRVVVRGKTDIEVLDARTKRTAIIIKEIPYQTNKASLVEKIAEHVENKNLEGI
SDIRDESDRSGMRVVIELKRGSDPSIVLNNLYRLTALQSGFSCNMVGILNGQPKQMGLKE
LLQAFLDFRCSVIERRAKFKLSQARERSHIIEGIIVGLDNLDAVIGIIRNASSNATASAS
LKKEFTLSDKQADAILDINLRRLTQLERNKFVNEGKSLREQISKLEQLLSSKHQILQLIE
QEALEIKNKFASPRRSTLEDTESGLLEEIDVIPNEEMLLALSEKGYVKRMKPDTFNLQNR
GTIGKSVGKLRVNDMMSDFLVCHAHDHVLYFSDRGIVYSARAYKIPECTRAAAGTPLIHM
LSLSSGERITSIIPVSEFAQDQYLLMLTVNGYIKKVSLSYFSSIRTTGIIAIQLVPGDEL
KWVRLCTNEDLVAMASQNGLVILGSCEMMRALSRNTRGQVAMKLKKGDRMASMDIIPAAL
RKNLERNTEAHISHSGKRASGPMLLFISESGIGKRVPLSSFRLSSLNRVGLKGFKFSSED
RLAAVFVVGSSMTEDGESDEQVVLVSQAGTVNRIKVRDISIQSRYARGVILMRLEHSGKI
QSASLISAGESEPEDFDDAVSL
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggctcctttctgcactgctttacttcgctgcactcccctcccctctccggcaactcgc
ttatcgtttctccgattcaactcgcccggaattcgatacctttcgagtctccgaagagcg
aagcctgtgaggcctattactgccaagcaagtcgatattgatggagagaccagagatgag
ggcaatggaagtgttttagttagggatgatggtgttagagatggaagaattgttccgatg
gagcttcacagggaggcgagtgaggcgtatatgtcgtacgccatgtcggtgttgcttggt
agggcgttgccggatgttagggacggtttgaagcctgttcatcgaaggattttatttgct
atgcatgaattgggtctatcctctcggaagccttataagaaatgtgcaagagtggtcggg
gaggttcttggcaagtttcacccacatggggataatgcagtttatgattccttggtccgg
atggctcaggatttttcattaaggtccccactgattcgggggcatggcaactttggttca
atggatgctgatcctcctgcagcaatgcgttatacagagtgtagattggaggcactcaca
gaagcaatgctgctggctgatttagagcaagacactgttgattttattcctaactttgac
aattctcaaaaagaaccctcggttttgccagccagggtaccaaacttgttgttgaatggc
tcttcggggattgcggttggcatggcaacaaacattccccctcataatcttggggagttg
gtggatgcgctttctgtgctgattcataatcctgaagcaacgctgcaagagtttctggag
tatatgccaggacctgacttcccaactggagggctaataatgggtaatcatggcatccta
gaggcataccgaactggtcgaggacgtgttgtagtgagaggaaagactgatatagaagta
cttgatgccagaaccaagcgcacagcaattatcataaaagagataccataccagacaaac
aaagcctctcttgttgagaaaattgctgagcatgtggagaacaagaatttggaaggcata
agcgacattcgtgatgagagtgatcgctctggaatgcgtgttgtgattgagctaaagagg
ggttcagatccttccattgttctgaacaatctctatcgcctcaccgctttgcagtccggc
ttcagctgcaatatggtgggtattcttaatggacaaccaaaacagatgggcttgaaggaa
ttgttgcaggcattcttggatttcagatgctctgtaattgaaagacgtgcaaagtttaag
ttgtcccaagcccgtgagagaagtcatattatcgagggcattattgtggggcttgataat
ttagatgcagtgatcggaataatcaggaacgcatctagtaatgcaacagcttcagctagt
ttaaaaaaagagtttacattatccgacaaacaagctgatgctatactggacataaacttg
agaaggcttacacagcttgagagaaataaatttgttaatgaaggaaaatccttgagggaa
caaatttcgaagttagagcaacttttgtcaagcaaacatcagatattgcagttgattgaa
caagaggcgcttgaaattaaaaataagtttgcctctccaaggagatcaaccttggaggat
actgaaagtgggctacttgaagagatagatgttatcccaaatgaagaaatgctattggca
cttagtgagaagggttatgtaaaacgaatgaagcctgacactttcaaccttcaaaaccgt
ggaacaattgggaagtctgttgggaagttgagggtaaatgacatgatgtctgacttcctt
gtctgccatgcccacgatcatgtcttatatttcagtgatcgaggcatagtctactcagcc
cgtgcttacaaaattccagaatgtacacgtgctgcagctgggactcctttaattcatatg
ttgtcgttatctagtggtgagaggattacttcgattattcctgtgagtgaatttgcccaa
gatcaatatcttttgatgctcactgtaaatggctacatcaaaaaagtgtctttgagttat
ttctcctccatcaggacaacaggaatcatagcaattcagctggttccaggtgatgaactg
aaatgggtacgtctctgcacaaacgaagaccttgtggcgatggcttcacaaaatgggttg
gttatcttaggttcttgtgagatgatgagagcgttgagtaggaatactcgtggtcaagtt
gccatgaaattgaaaaaaggagacagaatggcaagcatggacatcattcctgcagcctta
cggaaaaacctggaaagaaacaccgaagctcacatcagccacagtggtaagcgtgccagt
ggaccgatgttattgtttatatcagagagtgggatagggaagcgagttcctcttagcagc
tttcgtctatcatcactgaacagagttggcttgaaagggttcaagttctcatctgaagat
cggctggcagcagtttttgtagttggatcttcaatgacagaggacggcgaaagcgatgaa
caagttgttcttgtgagccaggctggcactgtcaatcgaattaaagttcgagatatatcg
atacagtctcgttatgcaaggggagtgattttgatgagactggagcattcgggaaaaatt
caatctgcatcgttgatatcagcaggagaatctgagcccgaggactttgatgatgctgtt
tccctctag
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