Daucus carota (carrot): 108208902
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Entry
108208902 CDS
T05350
Name
(RefSeq) myosin-11 isoform X1
KO
K10357
myosin V
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108208902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108208902
04131 Membrane trafficking [BR:
dcr04131
]
108208902
03029 Mitochondrial biogenesis [BR:
dcr03029
]
108208902
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dcr04812
]
108208902
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108208902
mRNA cycle factors
P-body specific factors
108208902
Membrane trafficking [BR:
dcr04131
]
Others
Actin-binding proteins
Myosins
108208902
Mitochondrial biogenesis [BR:
dcr03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108208902
Cytoskeleton proteins [BR:
dcr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108208902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
MCM5_C
nSTAND3
AAA_22
ComX
Flp1_like
Motif
Other DBs
NCBI-GeneID:
108208902
NCBI-ProteinID:
XP_017234986
LinkDB
All DBs
Position
2:complement(48867695..48893583)
Genome browser
AA seq
1559 aa
AA seq
DB search
MGTAGNNILVGSSVWTEDPSVVWIDGQVTKIKGKELEILTSNGNTVVANKSSVYPKDEDA
PAAGVDDMTKLSYLHEPGVLQNLAARYQLNEIYTYTGSILIAINPFQKLSHLYDGHMMEQ
YRGAPFGELSPHVFAIADVAFRAMVNEGKSNSILVSGESGAGKTETTKMLMHYLAYLGGH
KQSGGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKHGKISGAAIRTYLL
ERSRVCQISDPERNYHCFYLLCAAPEEEVKKYKLGDPTSFHYLNQSKCYELIGVNDSEEY
LATRRAMSIVGISETEQEAIFKVVAAILHLGNIEFAKGKEVDSSILKDEKSKFHLRTTVD
LLECDPRALEDALLKRVMVTPEEVIKRSLDPEAATVGRDGLAKTLYSRLFDWLVDKINKS
IGQDPNSKSLIGVLDIYGFESFKSNSFEQFCINYTNEKLQQHFNQHVFKMEQEEYTKEEI
NWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSTKLYSTFKANKRFIKPK
LSRTDFTIAHYAGEVQYQSDLFLDKNKDYVVAEHQDLLSASKCSFVAGLFPPLPEETTKS
SSKSSKFSSIGSRFKAQLQQLMETLNSTEPHYIRCVKPNNLLKPAIFENVNIIQQLRCGG
VLEAIRISCAGYPTRKTFFDFLSRFSFLAPEIMDGNLDETTACKKILEKAGLTGYQIGKS
KIFLRAGQMADLDSRRALKLSSSAKVIQRKIRAYLTRKHFRAIVFAAVALQAFCRGSIAI
QMFGNLKKEAATLKIQTNRRGRSARRAFNRLRYSVALIQTSIRAMIARKEFNYRRQTKAS
ILIQSRWRGHRDFAYYRKLIRASIVTQSRWRGIVAKRELRKLKMAAKETGALKEAKDKLE
KQVEDLQLRLQLEKRQRTDLEEEKGQEILKLQNSLQAMQSKVDEANALLAKERENAQKER
EIAQRESEEASVTVKETPVPVDNSKEIEELSAELETLKASCQSDKNRADEYERKYHEAIQ
SSEAKSQKLQETEVKIHQLQESLNRLEEKLSNKESEDKVFRQQALSTAQNNKVLADLEAE
NKALRQQVLQMNQSHKLLSSGRSRSVIQRGESLKGIDISGPSVQELREHADLKESPQKAS
NEKEQEYQDLLIKCISQDLGFAKGRPVAACIIYKCLRHWGSFEVEKTTIFDRIIQTISHA
IETAESNETLAYWMSNASTLLLLLQRTLRASVAAGLTPKYRRSPSIFGRMTKSFRGIPLS
SSLSFSHVDLATGLDTLYQVEAKYPALLFKQQLTACVEKIYGMIRDNLKKEISPLLGLCI
QAPRISRTNLLKGTARTLANAAAQEILVSHWQGIAKRFENFLNMLKSNQVPSYIVRKVFT
HIFSFINVQLFNSLLLRRECCSFSNGEYVRSGLAELERWCYNATDEYAGSAWDELKHIRQ
AIGFLVIHQKPQKTLDEISNELCPVLSMQQLYRISTMYWDDKYSTQSLSPDVISSMRALM
AEDSNNAVSSSFLLDDDSSIPFSVEELSRSMVQIDIADVEPPPLIRESSGFSFLTPTAK
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atgggtacggctgggaataatattcttgtaggttcttctgtttggacggaagacccaagc
gtagtctggatcgatgggcaagtaacaaaaatcaaagggaaagagcttgaaatactgact
tctaacgggaatacggtggttgcgaacaaatcttcggtttatccgaaggatgaagatgca
cccgctgctggagttgatgacatgacaaagctatcatatcttcatgaacctggagtcctg
cagaatttggcagccagatatcaactcaatgaaatctatacttataccggcagtattctt
atcgccattaatccattccaaaaactgagtcatttgtatgatggtcacatgatggaacaa
tacagaggagcaccctttggagaactgagtcctcatgtttttgctattgcagatgttgct
tttagggcgatggttaacgagggaaaaagcaactcaattctagtcagtggtgaaagtggg
gctggaaaaactgaaactactaaaatgcttatgcactaccttgcgtacttgggcggacat
aaacaaagcggaggacggacagtcgaacaacaagttctagaatctaatccagttctcgag
gcatttggaaatgcgaaaactgtcagaaacaataattccagtcggttcggtaaatttgtt
gaaattcagtttgataaacatggaaaaatatcaggagcagctatcagaacttaccttctt
gagagatctcgcgtatgtcagatttcggaccctgaacgcaactatcactgtttttacctt
ctttgtgcagcaccagaagaggaagttaagaaatataagctgggagatcctacatcattt
cactatcttaatcaatcaaaatgttatgaactcattggtgttaatgattctgaagaatat
ctcgccactagaagagccatgagtatagtcggcataagtgaaactgaacaggaagcaatt
tttaaagtcgtagctgcaattctccatcttggtaacattgaattcgccaagggcaaagaa
gttgattcatcaattttaaaagatgagaagtccaagttccaccttcgaacaacagtagat
cttctcgagtgtgatcctcgcgcattggaagatgcactactgaagcgtgtaatggttaca
cctgaagaagtcatcaaaagaagtcttgatccagaggcagcaacagttggcagagatggc
ttagccaagacactatattcacgcttgtttgattggttggtagataaaatcaacaaatca
attgggcaagatcctaattcaaaatctctaattggggttcttgacatctatggtttcgaa
agcttcaagagtaacagttttgaacagttttgcatcaactatacaaatgagaagctgcaa
caacattttaaccagcatgttttcaagatggaacaagaggagtatacaaaagaggagatc
aactggagctacatagaatttgttgataaccaagatgtcctagatcttatcgaaaagaaa
cctggagggatcattgctctgcttgacgaagcctgcatgttcccgaagtcaactcatgag
acattttcaactaagctttactcgaccttcaaagctaataaacgttttattaaaccaaaa
ttgtcgcggacggattttacaattgctcattatgctggagaggtccaatatcaatctgat
ctatttttggacaaaaacaaagactacgttgtcgccgaacatcaagatttgttgagtgct
tccaaatgctcttttgtagctggccttttcccaccacttcctgaagagaccaccaagtca
tcaagtaaatcttccaagttttcatctataggatctcggtttaaggcacaactccaacaa
ttaatggaaacgcttaattctacagaacctcattacatcagatgtgtgaagcctaataat
ctccttaaacctgctatttttgagaatgtcaacatcatacaacagttacgatgtggtggt
gttcttgaggcaattagaatcagttgtgccggctatcctactcgcaagacattttttgat
tttctaagtcgatttagtttcctcgctccggaaattatggatgggaatcttgatgaaacg
acagcttgcaaaaagattttggagaaggctggccttactggatatcagattggaaaatca
aaaattttcctaagagctggtcagatggctgatcttgattctcggagagcgctaaagctt
agcagttcagccaaagtcattcaaagaaagatcagagcttatcttactaggaaacatttt
cgtgctattgtgtttgcagctgttgctttgcaggctttctgtagaggaagcattgccatt
caaatgtttggtaatttgaagaaagaagcagcaactctgaaaattcagacaaataggcgg
gggagatcagcaaggagggcattcaacagacttcgatattctgttgctctcatccagaca
agtatacgagcaatgattgcacgcaaagagtttaactataggagacaaacaaaggcatca
attctaatacaatcacgttggcgtggtcatagagattttgcttactataggaagttgatt
agggcatccattgtcacacaaagcagatggaggggaatagttgcaaaaagggagcttcga
aagttaaaaatggctgcaaaggaaactggtgcactcaaagaagcaaaggataagcttgag
aaacaagtagaagaccttcaattgcgcttgcagttggaaaaacggcagaggactgattta
gaagaagaaaaagggcaggagatattaaagttgcagaattcattgcaagccatgcaaagc
aaagttgacgaagcaaatgcgttgcttgccaaggaacgtgagaatgcacagaaagaacgt
gaaattgcacagagagaaagtgaagaggcatctgttactgttaaagaaaccccagttcct
gttgataattctaaggaaattgaagaattaagcgcagaattggaaaccttgaaggcatca
tgtcaatctgacaagaatcgagctgatgagtatgaaagaaagtatcacgaggctatccag
tctagcgaagcgaagagccaaaagttgcaagaaaccgaagtgaaaatccaccagcttcag
gaatctttgaacaggcttgaagagaagctcagtaacaaagagtcagaagataaagttttc
cgtcagcaagctctatccacagcacaaaataataaggtcctggcagatttagaggcagaa
aataaagctcttcgccagcaggttttgcaaatgaatcaaagtcataagctcctatcatca
ggacgttcaagatcagttattcagaggggtgaaagcctaaaaggaattgatatctccggt
ccttcagtacaagaactgagggaacatgcagatttgaaggaaagtccccagaaagcaagt
aacgagaaagagcaggagtatcaggacttgctcatcaagtgcatctctcaagacctagga
tttgctaaaggcagacctgttgctgcctgcatcatatacaaatgtctaaggcattgggga
tcctttgaagttgaaaaaactaccatttttgaccggatcatacaaaccataagtcatgcc
attgagactgcggagagtaatgaaactctagcatattggatgtccaatgcatcaactctg
ttgcttttactgcaacgcacactgagagctagtgttgctgctgggctgactccaaaatat
aggcgatcaccatctatatttgggagaatgacaaagagctttcgaggaataccactaagc
agtagcctttctttttcacacgttgacctggctactggactagataccctttatcaggtt
gaagcaaaatatcctgctttgctgttcaaacagcaactgacagcatgtgtagaaaagatt
tatggcatgatccgtgataatctgaagaaagagatttctccattgcttggcttgtgcatt
caggctccaagaatatccagaacaaacctactcaagggaactgctcgtacacttgcaaat
gctgctgctcaagagattttggtgtctcactggcaaggcattgcaaagcgatttgaaaat
ttcttaaatatgctaaaatctaatcaggtaccctcgtacatagttcgtaaagtgttcaca
cacatattttccttcatcaatgtgcagttatttaacagtcttcttctaagacgagaatgc
tgctcattcagcaatggtgagtacgtcaggtctggattggctgaactggaacgttggtgc
tacaacgcaactgatgagtatgcaggttcagcatgggatgagctgaagcatataagacag
gctatcgggtttctggtcatacatcagaagccacagaagacactggatgagataagtaac
gagttgtgcccggtgcttagtatgcagcagctctacagaattagcaccatgtactgggat
gacaaatatagcacacagagtctttcaccagatgttatatctagcatgagggctttgatg
gccgaagattcaaataatgcagtcagcagttcgttcttattggatgacgattcaagcata
ccattctcagttgaagagctctctagatcgatggttcagattgatattgcagacgttgaa
ccacctccacttattcgtgaaagttcaggcttcagttttttaactcctactgccaagtga
DBGET
integrated database retrieval system
