Daucus carota (carrot): 108208935
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Entry
108208935 CDS
T05350
Name
(RefSeq) U-box domain-containing protein 13
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108208935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108208935
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108208935
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
U-box type E3
108208935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
zf-RING_UBOX
zf-C3HC4_4
KAP
HEAT_EZ
Neurochondrin
zf-Nse
Arm_2
zf-C3HC4_2
MLKL_N
zf-C3HC4
MCAfunc
Motif
Other DBs
NCBI-GeneID:
108208935
NCBI-ProteinID:
XP_017235063
UniProt:
A0AAF0WDE3
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All DBs
Position
2:complement(27477840..27485632)
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AA seq
685 aa
AA seq
DB search
MEDDDAGRALVKEMIELVSKIAEISDYRSSVKKQYSNLARRLKLLTPMFEEIRDSKQKVN
RVSVVQLSKLKEAMLLAFELLRFGSQGSKIYMVLEREQIMNRLQEVTAQLESALSEISFE
QLDISDEIQEQVELVLAQFRRAKGRIDAPNVELYEDLALLYNMKHDAVADPDVLRRLVDN
LQLSGITDLTQESLALHEMVATTGRDPGESIEKMSMLLKKIKDFVQTENPKLDSPLMESG
SVQAGTDKIQKIPEDFRCPISLDLMVDPVIVSTGQTYERSCIEKWLEAGHGTCPKTQQTL
SSLSLTPNYVLRSLIAQWCEANGIEPPKRSARLSKTKSACSPAERSKIDTLLQKLTSVNP
ENKRFAAGEIRLLAKRNADNRVALAEAGAIPLLVGLLSTPDSRTQEHAVTALLNLSICED
NKGSIVSSGAVPGIVYVLKKGSMEARENAAATLFSLSVVDENKVTIGGFGAIPPLVTLLS
EGNQRGKKDAATALFNLCIYQGNKGKAVRAGIVPTLMKLLTEPQGGMVDESLAILAILAS
HSEGRAAIGSAEALPVLVAVIASGSPRNKENAAAVLVHLCSADQQYLIEAQELGVMSSLI
DLVQNGTDRGKRKAGQLLERIKHQNLTQALNESQAQPLIESQSQARATSLIPAPAPAPAL
ASSPIPAPSQTQQSRPCLSAHFVDS
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgatgacgcaggacgagctttagtgaaggagatgatcgaattagttagtaaa
atagcggagatttcggattacaggtctagtgtgaagaaacagtacagtaatttagccagg
aggttgaaattgttgacgccaatgttcgaagagattcgagatagtaaacagaaagttaat
cgagtttctgtggttcagctaagcaagctgaaagaggcaatgttgttagctttcgagttg
ttgcgattcggaagccaagggagtaagatctatatggttctagaaagggaacaaatcatg
aatagattgcaggaagtgacagctcagttagaatctgctttgagtgaaatatcctttgag
caacttgacatatcggatgaaatccaggaacaggttgagctggttcttgctcagttcaga
agagccaaaggaaggattgatgcacctaatgttgaactgtatgaggatctagcattgctt
tacaacatgaaacacgatgctgttgcagatccagatgtcctaaggagattggtggataat
ttacagctaagtggaattactgatctcacacaagaatcactagcgttgcatgaaatggtt
gctactactggtagagatccgggggagagcatagaaaagatgtcaatgctactaaaaaaa
atcaaggactttgttcagacagagaatccaaaactagattctcccttgatggaaagcggc
agtgtacaagcaggcaccgataaaattcaaaaaatacctgaagatttccgctgtcctata
tctctggatttgatggttgatccggttattgtttcaacaggacagacctacgaacggtct
tgcatcgaaaagtggctggaagcagggcatggcacttgtccaaaaacacaacaaactctt
agtagcctctctcttacacccaactatgtcttacgtagtctaatagcccagtggtgtgaa
gcaaacgggattgaaccacctaaacgatctgctcgactcagcaagacaaaatctgcatgc
tctcctgctgaacgttccaagatagatactctccttcaaaaactaacatctgtaaatcct
gaaaacaagcgttttgcagcaggtgaaatccgccttcttgccaagcggaatgctgataat
cgtgtggcccttgctgaagctggtgccattccattacttgtaggtctcctttcaactcca
gattcacgcacacaggagcatgctgttactgcactccttaacctctccatttgtgaggat
aacaaaggaagcatagtttcttctggtgcagttcctggtatagtttatgtcctgaagaag
ggaagtatggaagcaagggaaaatgcagctgccaccttgtttagcctttcagttgtggat
gaaaataaagttactatcggtggttttggagcaattccaccacttgtgacactactcagt
gagggcaaccaaagggggaagaaggatgctgcaacagcattattcaatttgtgcatatac
caaggtaacaagggtaaagccgtgagggctggaattgtaccaacattgatgaagttactt
acagaaccccaaggtggaatggtggacgagtcgcttgccattctggctatactggccagt
cactctgaggggagggcagccattggatctgcagaagctctgccagtcttggttgcagtc
attgccagcggctctccaaggaataaggagaatgcagctgctgttttagttcacctctgt
tctgctgaccaacaatatttgatagaagctcaagaacttggggtcatgtcctcgctgatt
gatttagtgcaaaatggcactgataggggtaagcgtaaggctggacagttgcttgagcgt
attaagcaccagaatctgactcaggcgcttaacgagtctcaagctcagcctctaattgag
tctcaatctcaagcccgggcaacatctctgattcccgccccagctccagctccagctctg
gcttcatctccgattcccgctccctctcagactcagcagtcacgaccgtgcttatctgca
cattttgttgatagctga
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