Daucus carota (carrot): 108209042
Help
Entry
108209042 CDS
T05350
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
KO
K10140
DNA damage-binding protein 2
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03420
Nucleotide excision repair
dcr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108209042
09124 Replication and repair
03420 Nucleotide excision repair
108209042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108209042
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108209042
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108209042
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
108209042
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_EIPR1
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
EIF3I
WD40_RFWD3
Beta-prop_Aladin
WD_LRWD1
NBCH_WD40
VPS8_N
Motif
Other DBs
NCBI-GeneID:
108209042
NCBI-ProteinID:
XP_017235233
UniProt:
A0AAF0WG76
LinkDB
All DBs
Position
2:49263899..49269118
Genome browser
AA seq
563 aa
AA seq
DB search
MASRRSQFPQVVIGRDSDSEESLSDEEEEFVEEEDDEEVEEVEEEEEDEEVETKDEEKTQ
EGLSEDNKGKAPITISLKKVCKVCKKTGHEAGFKGATYIDCPMKPCFLCKLPGHTTITCP
HRVATEYGVIPATHKNTQNALDFIFERQLRPKITKIKPKLVIPNYVTGAVVRYHSRRVTC
LEFHPTKYNIILSGDKKGHLGVWDFIRVCEKTVYRNIHSCILNHMKFNPRNDGTVYGASS
DGTISCTDLETGLTSSLMNLNPNGWQGASTWRMLYGLDVNPENGLVLVADNFGYLYSVDS
RSNSQVGEAVLIHKRGSKVTGLHCNPVQPNLLLSCGNDHFARLWDIRRLEAGSSLYQLSH
KRVVNSAYFSPQSGSKILTTSQDNRIRVWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEW
DPKDPSESVAVVGRYISENYRGLAALHPVDYINTSTGQLIAAVMDPNIMTISPVNKLHPQ
YDILASGSSRSIYIWKPDKDSSEFIEQKVKKNILLCGKAEKKRKSKGDGDESDDDISKAK
KSIKSAKTKTKANSIVLKAKDKC
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaagaagatcgcagtttccacaagtggtgattgggagagactcagactcagaa
gaaagcttatcagatgaagaagaagaatttgtagaagaagaagacgacgaagaggttgaa
gaagttgaagaagaagaagaagatgaagaggtcgaaacaaaagatgaggagaaaacacaa
gagggtttgtccgaagacaacaaaggaaaggcgcccattactatcagtcttaaaaaagtt
tgtaaagtgtgtaagaaaacaggtcatgaagcagggtttaagggggcaacttacattgat
tgtcctatgaaaccttgttttctctgcaaattgccgggacatacgacaatcacctgtcct
catcgagttgccactgaatatggtgttattccagcaacccacaaaaatacacagaacgcc
ttggacttcatttttgaacgacaattgagacccaaaattacaaagattaaaccaaagctt
gttataccaaattatgtgaccggtgcggtagttagataccatagccgaagggttacatgc
ttggaatttcacccaactaaatataacattattttatctggtgataagaaaggacatctt
ggagtttgggattttatccgtgtgtgtgaaaagacagtttatcggaacatacatagttgc
atactcaatcacatgaagttcaatccgagaaatgacggcacagtatatggagcatcctca
gatggaacaatcagctgtacagacttggagacaggtcttacatcatcattgatgaacctt
aatccgaatgggtggcagggcgcaagcacatggaggatgctctacgggctggatgtaaat
ccagagaatggtcttgtgcttgttgcagataattttggatatctttactcggttgatagc
cgttctaatagccaagttggggaggctgtcttgattcataaaaggggaagcaaagttaca
gggctgcactgcaatcctgttcagccaaatctcctcctgagttgtggaaatgatcacttt
gctcgtttatgggatattcgccgattggaggctggatcttctttgtatcagctttcacat
aaacgtgtagtgaactcagcatacttttctccacagagcggcagtaaaatacttaccaca
tcgcaagacaatcgcattcgtgtatgggattctattttcgggaatctggattctccgagt
agagaaattgtacacagtcatgatttcaatcgacatttgacccccttccgagctgaatgg
gatccaaaggacccttcggagtcggttgcagttgttggacgttacataagtgaaaattac
agaggacttgctgcactgcatcctgttgattatattaacaccagcacggggcaactgatt
gctgcggtcatggaccccaacatcatgactataagccctgtgaacaagctgcatcctcag
tatgatattctggcatctggcagctcaaggtcaatatacatctggaagcctgacaaggat
tcgtccgagttcatcgagcagaaagttaaaaagaatatccttctttgtggtaaggctgaa
aagaaaaggaagtccaagggcgacggtgatgagtcagatgatgacatctcgaaagctaag
aagagcatcaagtccgcaaaaacgaagacgaaagcaaactcaatagtcctaaaggccaag
gacaagtgttga
DBGET
integrated database retrieval system