KEGG   Daucus carota (carrot): 108209042
Entry
108209042         CDS       T05350                                 
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
  KO
K10140  DNA damage-binding protein 2
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03420  Nucleotide excision repair
dcr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108209042
  09124 Replication and repair
   03420 Nucleotide excision repair
    108209042
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dcr04121]
    108209042
   03400 DNA repair and recombination proteins [BR:dcr03400]
    108209042
Ubiquitin system [BR:dcr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     108209042
DNA repair and recombination proteins [BR:dcr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      108209042
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_EIPR1 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd EIF3I WD40_RFWD3 Beta-prop_Aladin WD_LRWD1 NBCH_WD40 VPS8_N
Other DBs
NCBI-GeneID: 108209042
NCBI-ProteinID: XP_017235233
UniProt: A0AAF0WG76
LinkDB
Position
2:49263899..49269118
AA seq 563 aa
MASRRSQFPQVVIGRDSDSEESLSDEEEEFVEEEDDEEVEEVEEEEEDEEVETKDEEKTQ
EGLSEDNKGKAPITISLKKVCKVCKKTGHEAGFKGATYIDCPMKPCFLCKLPGHTTITCP
HRVATEYGVIPATHKNTQNALDFIFERQLRPKITKIKPKLVIPNYVTGAVVRYHSRRVTC
LEFHPTKYNIILSGDKKGHLGVWDFIRVCEKTVYRNIHSCILNHMKFNPRNDGTVYGASS
DGTISCTDLETGLTSSLMNLNPNGWQGASTWRMLYGLDVNPENGLVLVADNFGYLYSVDS
RSNSQVGEAVLIHKRGSKVTGLHCNPVQPNLLLSCGNDHFARLWDIRRLEAGSSLYQLSH
KRVVNSAYFSPQSGSKILTTSQDNRIRVWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEW
DPKDPSESVAVVGRYISENYRGLAALHPVDYINTSTGQLIAAVMDPNIMTISPVNKLHPQ
YDILASGSSRSIYIWKPDKDSSEFIEQKVKKNILLCGKAEKKRKSKGDGDESDDDISKAK
KSIKSAKTKTKANSIVLKAKDKC
NT seq 1692 nt   +upstreamnt  +downstreamnt
atggcctcaagaagatcgcagtttccacaagtggtgattgggagagactcagactcagaa
gaaagcttatcagatgaagaagaagaatttgtagaagaagaagacgacgaagaggttgaa
gaagttgaagaagaagaagaagatgaagaggtcgaaacaaaagatgaggagaaaacacaa
gagggtttgtccgaagacaacaaaggaaaggcgcccattactatcagtcttaaaaaagtt
tgtaaagtgtgtaagaaaacaggtcatgaagcagggtttaagggggcaacttacattgat
tgtcctatgaaaccttgttttctctgcaaattgccgggacatacgacaatcacctgtcct
catcgagttgccactgaatatggtgttattccagcaacccacaaaaatacacagaacgcc
ttggacttcatttttgaacgacaattgagacccaaaattacaaagattaaaccaaagctt
gttataccaaattatgtgaccggtgcggtagttagataccatagccgaagggttacatgc
ttggaatttcacccaactaaatataacattattttatctggtgataagaaaggacatctt
ggagtttgggattttatccgtgtgtgtgaaaagacagtttatcggaacatacatagttgc
atactcaatcacatgaagttcaatccgagaaatgacggcacagtatatggagcatcctca
gatggaacaatcagctgtacagacttggagacaggtcttacatcatcattgatgaacctt
aatccgaatgggtggcagggcgcaagcacatggaggatgctctacgggctggatgtaaat
ccagagaatggtcttgtgcttgttgcagataattttggatatctttactcggttgatagc
cgttctaatagccaagttggggaggctgtcttgattcataaaaggggaagcaaagttaca
gggctgcactgcaatcctgttcagccaaatctcctcctgagttgtggaaatgatcacttt
gctcgtttatgggatattcgccgattggaggctggatcttctttgtatcagctttcacat
aaacgtgtagtgaactcagcatacttttctccacagagcggcagtaaaatacttaccaca
tcgcaagacaatcgcattcgtgtatgggattctattttcgggaatctggattctccgagt
agagaaattgtacacagtcatgatttcaatcgacatttgacccccttccgagctgaatgg
gatccaaaggacccttcggagtcggttgcagttgttggacgttacataagtgaaaattac
agaggacttgctgcactgcatcctgttgattatattaacaccagcacggggcaactgatt
gctgcggtcatggaccccaacatcatgactataagccctgtgaacaagctgcatcctcag
tatgatattctggcatctggcagctcaaggtcaatatacatctggaagcctgacaaggat
tcgtccgagttcatcgagcagaaagttaaaaagaatatccttctttgtggtaaggctgaa
aagaaaaggaagtccaagggcgacggtgatgagtcagatgatgacatctcgaaagctaag
aagagcatcaagtccgcaaaaacgaagacgaaagcaaactcaatagtcctaaaggccaag
gacaagtgttga

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