Daucus carota (carrot): 108209065
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Entry
108209065 CDS
T05350
Name
(RefSeq) nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108209065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108209065
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108209065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
HEAT_2
Motif
Other DBs
NCBI-GeneID:
108209065
NCBI-ProteinID:
XP_017235270
UniProt:
A0A166EFF1
LinkDB
All DBs
Position
2:complement(48791588..48804612)
Genome browser
AA seq
1463 aa
AA seq
DB search
MSWENEINLSDVSSAGLVVSDRIGRDVASHLDLEEALEASRYSSHPYSTHPREWPPLVEV
LDTWELPPVLVEKYNAAGGEGTALCGIFPEIRRAWASVDNTLFMWRFDKWDGQCPEYSGE
EEAICAVGLAKAKPGIFVEAIQYLLILATPVEIILVGVCCSRKGDGTDPFAEVSLQPLPQ
YIVPSDGITMTSVACTDRGHIFLSGRDGHIYELQYTTGSGWHKHCRKVCVTAGLEGVISR
WLLPSVFKFGAVDPIVEMVVDNERQTLYARTEEMKIQVYSLGPNGDGPLKKVAEERNLIS
KDLHYGGRQASGNRTSRSTKTSIVCISPLSTLESKWIHLVAVLSDGRRMYLSTTQSSGNN
GSVGALGGFSNSHQKPSCLKVVTTRPPPPLGVGGGLAFGPMSLASRSHNDDLSLKIESAY
YAVGTLVLSDSSPTTVSSLLIVNKDSTTQSSSGNIGTGARTSKALRESVSSLPIEGRMLF
VADISPMPEAGATLQSLYSQLEFLGFDRSMESCERLTEKIWARGELQTQHILPRRKIVVF
STMGMMEIVFNRPVDILRRLLESSSPRSILEDFFNRFGAGEAAAMCLMIAARIVQTENLI
SNVVAEKAAEAFEDPRVVGVPQLEGSSGLSNTRTAASGFSMGQVVQEANPVFSGAYEGLS
LCSSRILLPLWEFPVMVSKCDIASSDRMDENGIIVCRLSIEAMQVLEDKLRSLERFLKSR
KNQRRGLYGCVSGLGDLTGSILIGMGSDLGASDRSMVRNLFGPYPRNVESSEAVLSNKRQ
RLPYSSAELASFEVRAIECTRQLLLRCGEALFLLQLLSQHHVTRLIQGFDENIKRALVQL
TFHQLVCSEEGDRLATRLVSALMEYYTGPDGRGTVDDISGRLRDGCPSYYKESDYKFYLA
VERLERAVATPNKEERESLAREAFSYLSKVPESADLRTVCKRFEDLRFYEAVVRLPLQKA
QAVDPAGDASNEHIDAGIREYALAQREQCYEIITNALRALKGDVSQRELRSPIRPVAQST
LDPASRKKYICQIVQLGVQSPDRVFHDYLYRTLINLGLEKELLEFGGPDLVPFLQNACRE
PLQEVRAASAMASATVPSNQAKYFELLAQYYVMKRQHVLAAHVLLRLAERRSTNDEVAPT
LEQRRQYLTNAVLQAKSASDGDGIVGSSRSALDDGLLDLLEGKLTVLQFQIKIKDELEAM
ASKLEASTYPSEPVAGDIPTDGVMYDANILRTAREKAKELSLELRSITQLYNEYAVPFEL
WEICLEMLYFANYSGDADSSIVRETWARLLDQALSNGGIAEACSVLKRVGSHIYPGDVSI
LPLETLCLHLEKASLDRLTSGVESVGDEDVARALIAACKGSTELVFNTYDQLISSGVVPQ
PLSLKLRLLRSVLTVLREWAMSVYAQRMGTSKQGVRDKITSAANRYMTEVRRLPLPQNQT
EAVYRGFRELEESLLSPYHLDRF
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgggaaaacgagattaatctgagcgatgttagcagcgcaggtctcgttgttagt
gaccgaattggccgtgacgtggcttctcaccttgatttagaggaagctcttgaagcttcc
agatactccagccatccctattctactcatcccagagagtggcctcctttggttgaagta
ttggacacttgggagttgccccctgtattagttgaaaaatataatgcggctggtggtgaa
ggaactgcgttatgtggaatatttccagagatacgcagggcctgggcttctgtggataat
acattattcatgtggcgatttgataagtgggatggtcaatgtcctgaatatagtggagag
gaagaagctatatgtgctgttggcttggccaaagctaaacctgggatttttgtagaggcc
attcagtatctcttaatcttggcaactccggttgagataatcctagtgggagtgtgctgc
agccggaaaggtgatggaactgatccatttgctgaggtttcactacagcctttgccgcag
tatattgtaccatctgatggtataacaatgacatctgttgcgtgtaccgatagaggtcat
attttcctgtctggtcgtgatggccacatatatgaactacagtatactactggttcaggt
tggcataagcattgtcgtaaagtatgtgtgacagcaggtctggaaggcgttatttccaga
tggcttttaccaagtgtattcaagtttggagctgttgacccaattgtggaaatggttgtt
gataatgaaaggcagacgttgtatgctcggacagaagagatgaaaatccaagtttattct
ttggggccaaatggggatggacctcttaagaaagtggcagaagagagaaatttgatcagc
aaggatttacattatggcggtaggcaagcatcaggaaatagaaccagtcgatctacaaag
acttccatagtttgcatttctcctttatcaacattagaatcaaaatggatacaccttgtt
gctgttctatcagatggcaggagaatgtacctgtcaactactcaatctagtggaaataat
ggttctgtgggagctctgggtggcttcagtaatagtcatcagaaacctagctgcttaaaa
gttgtaacaaccaggccgccgcctcctttaggggttggtggtgggcttgcctttggaccc
atgtctcttgctagtagatcacataatgatgatctgtctctgaagatagaatcagcttat
tatgctgttggaactcttgtcctttctgattcatctccgaccactgtttcctccctatta
attgtgaacaaggactcaactacacaatcatcatctggcaacatagggacaggtgctaga
acttccaaggcactaagagaatctgtatcttccttgcccattgaagggcgcatgctgttt
gtggcagatatctcacccatgccggaggcaggagccacgttacagtcactatattctcag
ttggagtttcttggatttgataggtcgatggaatcttgtgaaagattaactgaaaagata
tgggctaggggtgagcttcaaactcaacatatacttcctagaaggaaaattgtggtgttc
agtaccatgggcatgatggaaatagttttcaaccgtccagtggacatcctgaggaggttg
ctcgagtcaagctcccctagatcaatattagaagatttcttcaatcgattcggagctgga
gaggcagctgcaatgtgtctaatgatagctgcaaggatcgttcaaactgaaaaccttata
agcaatgttgttgccgagaaggcagctgaggcttttgaggacccacgagttgttggagta
ccccaacttgaaggtagcagtggtttgtcgaataccagaactgcagctagtgggtttagc
atgggtcaggttgttcaagaggccaaccctgtattttctggtgcttatgaagggctctct
ttatgctcatcaaggatacttttacctctttgggagtttcctgtcatggtctcgaaatgt
gatatagcttcatcagatcgtatggatgaaaacggtataattgtatgcaggctttcaata
gaggcaatgcaagtccttgaagacaaacttcgttctctagagaggttccttaagtctaga
aaaaatcagaggcgtggactatatggctgtgtctctggtcttggagacttgacaggttca
attttaattggaatgggttccgacctgggtgcaagtgaccgaagtatggttcgaaatttg
tttggaccctatcctcgaaatgttgagtcgagcgaagctgttttatccaataaaaggcaa
cggcttccctatagttctgcagaactagcttcatttgaggtgagggcgattgaatgcacc
aggcaattgctcctccgatgtggtgaagctttgtttctgcttcaacttctttcgcagcat
catgtcacacgattaattcagggctttgatgagaatataaaacgagcattggttcagtta
acgtttcatcagttagtctgctctgaggagggtgaccgacttgctacaaggcttgtatct
gcattgatggagtattatacaggtcctgatggaagggggacagtagatgatataagtggt
agactacgtgatggttgtccaagctattacaaagagtctgattacaaattttacttggct
gttgaacgtcttgagcgagcagttgctacccctaataaggaggaaagggaaagtcttgca
agagaagcttttagttatttgagcaaagttccagagtctgcagacctgagaactgtttgt
aaacgctttgaggacttaagattctatgaagctgtggtccgcctaccactgcaaaaggca
caagctgtagatcctgctggggatgcttccaatgagcatatagatgcaggaattcgagaa
tatgcacttgctcagcgtgagcagtgctatgagattattaccaatgctttgcgtgctttg
aagggtgatgtttcacaaagggaattgcggtctccaattaggcctgtggcccaatctact
cttgatccagcctctcggaaaaaatatatatgccagattgttcagcttggtgtacaatca
cctgatagagttttccatgactatttataccgaactttaattaatttgggccttgaaaag
gaattgctagaatttggaggccctgatctagttcctttcctgcaaaatgcttgtcgtgaa
cctttacaagaggtcagggctgcttctgcgatggcatcagcaacagttccatcaaatcaa
gctaaatactttgagcttctagcacagtattatgtcatgaaaagacaacatgtcttagct
gctcatgtattgttgagacttgcagaaaggcgctccacaaatgatgaagttgcccctaca
ctcgaacagaggcgtcaatacctgactaatgcagtgctacaggcaaagagtgcaagtgat
ggtgatggcatagtaggttcttcaaggagtgctttagatgacggactgttggatttactg
gaaggaaaactcaccgttcttcagtttcagataaagatcaaagatgaattggaggcaatg
gcttctaagttagaggcctccacgtacccgtctgaacctgttgcaggtgatataccaact
gacggcgtcatgtatgatgccaatattttacggacagcacgagagaaggcgaaagaatta
tcactggaattgaggagtattacacaattatacaatgaatatgctgttcccttcgagctt
tgggagatatgcttggaaatgttgtattttgcaaactactcgggggatgctgatagtagc
atcgtaagggagacttgggcgagacttctcgatcaagctctttcaaatggaggcattgct
gaagcttgttctgttttaaaaagagttgggtctcatatctaccctggagatgtatctatc
ttacctttggagacattgtgtcttcatcttgaaaaggcctccctggaccgattaacttca
ggagtggaatctgttggggatgaagatgttgcaagggctctgattgctgcctgcaaggga
tcaactgagcttgtttttaatacttatgatcagctgatatccagtggagtagttccgcag
ccactaagtttgaagttgcggcttctgcgctcagtgctgactgtacttcgggagtgggct
atgtctgtgtatgcccagagaatgggtacaagtaaacaaggtgttcgtgacaagatcact
agtgctgcaaacagatatatgacagaggtgcgaaggttgccccttccgcaaaatcagaca
gaagctgtgtatcgtgggtttagagaactcgaggagtcacttttaagtccttatcatctt
gaccgattctga
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