Daucus carota (carrot): 108209077
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Entry
108209077 CDS
T05350
Name
(RefSeq) GTPase LSG1-2
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108209077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dcr03009
]
108209077
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
Pre-60S particles
GTPases
108209077
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
AIG1
TMEM214
Motif
Other DBs
NCBI-GeneID:
108209077
NCBI-ProteinID:
XP_017235295
UniProt:
A0AAF0WEH1
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All DBs
Position
2:41482542..41488531
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AA seq
592 aa
AA seq
DB search
MGKSEKTGLGRSLVKKHNNMIQQSKDKGKVYKSLQKKVLESVTEVTDIEAVIEQADEAEL
LYSNDKASLNPKIDMDSTSSTIEMTPDQKREQQEREQELHASSLRVPRRPPWTLETTIEE
LDTNERQAFLIWRRDLARLEENENLVLTPFEKNLDIWRQLWRVLERSDLMVMVVDARDPL
FYRCPDLEAYAKEIDEDKKTLLLINKADLLPFSIRDKWAKYFRLHGILFVFWSAKVAAAA
VDGKEASFSSELQNGQDESVDDDTRVYGREELLARLQSEAEEIAAMKKLRPKAPVGRGFP
KKDDGVTVGFVGYPNVGKSSTINALVGEKKTGVTHTPGKTKHFQTINISDKLTLCDCPGL
VFPSFTSSRYEMIASGVLPIDRMTEHREAIQVAANRVPRHVIESVYKISLPRPKTYEPQN
RPPLASEFLRAYCTSRGWVASSGLPDETRAARIILKDYIDGKLPHYELPPDMSAEEAEAV
LYDPTYLTSLPEESEEESSGDENNQSLTGEDGKGPSLEHVLDDLSTFDIDNGLASTKALT
KKKPSGPSHKQHKKPQRNKNRSWRVKDNGEDGMAIVRAYQKPLNSRQPVEAG
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggggaagagcgagaaaaccgggctaggaaggagcctggtgaagaagcacaacaacatg
atacaacaatccaaagataagggcaaagtttacaaatctctccagaagaaagtcctcgaa
tccgttactgaagttaccgatatcgaggcggttatcgaacaggccgacgaagctgagctg
ctttattccaatgataaagcctctcttaatcccaagattgatatggattcaacctctagt
actattgaaatgacacctgaccagaaaagggagcaacaggaaagagagcaggaattgcat
gccagcagtctccgtgttccacgcaggccaccatggactttagaaacaaccattgaagag
cttgatactaatgagagacaagcattcttgatttggagacgagaccttgcaagacttgag
gagaatgagaacctcgttttaactccatttgaaaagaacttggacatatggagacaactt
tggagggtacttgaacgcagtgatctgatggtaatggttgttgatgcacgagatccgcta
ttttatagatgccccgatcttgaggcatatgcaaaagaaattgacgaggataaaaaaaca
ctactacttattaacaaggcagatctcttaccattttcaatcagagacaagtgggcgaaa
tacttccgccttcatgggattctttttgtattttggtcagcgaaagttgctgctgcagcc
gtagatgggaaggaagcaagtttttcatcagaattgcaaaatggtcaggatgaatcagtt
gatgatgatacgagagtatatggccgtgaggagctattggcacgtttacagtctgaagct
gaggagatagctgcaatgaagaaattgaggccgaaggctccagttggtcgaggttttcct
aagaaagatgatggtgtaacagttggatttgtggggtatccaaatgtcggaaaaagctca
acaattaatgccttggttggtgagaaaaagacaggtgttactcacaccccgggaaagacc
aagcatttccaaacaataaatatatctgataaactcacattgtgtgattgccctggatta
gtgttcccatccttcactagctcaagatatgagatgatagcatctggtgttttgccaatt
gaccgcatgactgagcatcgagaggctatacaggttgcagcaaatcgagttcccaggcat
gtgatcgagagtgtctacaaaatatctttaccgagaccaaagacatatgaacctcaaaat
cgacctcctctggcatcagaatttctacgggcatattgcacctcccgtggttgggttgcc
tcaagtggactaccagatgaaactagagctgcccgaataattttgaaggattacattgac
gggaagctacctcactatgaattgcctccagatatgtcagctgaggaggccgaagctgtt
ctgtatgatcctacgtacttaaccagtttgcccgaggaatctgaagaagaatcatcaggc
gatgagaacaatcaaagtctgacaggcgaagatgggaagggaccaagtctggagcatgtg
ctggatgatctgagtacattcgacattgacaatggactagcttccaccaaggccctaact
aagaagaagccatcaggtccatctcataaacaacacaagaagcctcagagaaataagaat
cggtcatggcgagttaaagacaatggagaggatggaatggcaatagtgagggcatatcag
aaacccctgaattctagacaacctgtggaggctgggtaa
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