Daucus carota (carrot): 108209082
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Entry
108209082 CDS
T05350
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor rrn3
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcr03021
]
108209082
Transcription machinery [BR:
dcr03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
108209082
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
108209082
NCBI-ProteinID:
XP_017235303
UniProt:
A0AAF0WG23
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Position
2:50651670..50661346
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AA seq
626 aa
AA seq
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MGVQLAEGHQVETEDVNFTDLEVSYHVRDALKSASLGQSDSYHDLLGVLHHTERLTPDEV
AMLVTSLKALSGAVSYIDSDHHQMLLSSISGMSLWNYGPDVMDVLVELVVALAAVSGKYL
HLCLDMLVRNFVPPLSFLRLLQQPRGLAKKEQVLCRVHAALKEIADLVPLAPLRLEKVIK
ERMPHKSSKQPWILSVMYVENMLRLDGGAMGDLVGRTMLVEVMNRIVELDVEIGWDELIA
DDSNKGMFEMELEEQEMSSEAEISKEKISRDSSIQKTLSGNEVAEHLDLLMVFIFEHLKT
CHASGRLDQVFEVLLLSFQSTVLHAYKSKFSQFVMFYACSLDPVNYGERFANMLLDIYKN
SMYVLEWRMGAVSYLASYLSRANFMSASFVVSVLESLVDWCFTYCKGHNGETNPKAHRVF
YSGIQAIMYILCFRMRSVLGVPRIESQLSLLPIQAILKHSLNPLKVCLPSIVHEFLQQAR
AAQLFSVSEDFHLYGVLESEVSADFGGLERLDMFFPFDPYLLQNSDRFIRPNFIFWSMVR
TTYEDDDEDEDEDGDQSEGSTDEDIENDSRDDDRIAMSFEDDLAIDEFDNSLNKMSITPK
NYNGAQLQGYKQMPSRIRPSASPVSL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtacaactagctgaaggtcatcaagtggagacggaagatgttaattttactgat
ttggaagtttcttatcatgttcgggatgctcttaaatccgcaagcttgggtcaatccgac
agttatcacgacttgcttggagttctgcaccatactgaacgcctcacaccagatgaggtg
gccatgcttgtgacaagtttaaaggccctttctggagcagtttcttacatagattctgat
caccaccaaatgcttctttcatctataagtggaatgagcttgtggaactacggtccagat
gtgatggatgtgttagttgagttggtagttgcattggctgcagtgagtggaaaatacctc
catctatgcttggatatgcttgtaagaaattttgtgccgcctctatctttccttaggcta
ttgcagcagccacgaggtcttgcaaaaaaggagcaagttctttgtcgtgtgcatgctgcc
ctaaaggaaattgctgatttggttccccttgcacctctgagattggaaaaagttattaag
gagagaatgcctcacaaatcctcaaagcaaccttggattttgtcggttatgtatgtggag
aatatgctaagattggatggtggtgctatgggagaccttgttggtagaactatgcttgtg
gaagtgatgaacaggattgtagaactggacgtcgaaattggatgggacgaactcatagct
gatgattcaaataaaggaatgtttgagatggaattggaagaacaggagatgtcttcggag
gctgaaataagcaaagagaagatttccagagactcatctattcagaagactctttcgggt
aatgaagttgctgagcacttggatcttttgatggtattcatatttgaacaccttaaaaca
tgtcatgcaagcggtcgtctggatcaggtatttgaagtattactactctcattccagagt
accgtgttgcatgcatacaagtcaaagttttcccagttcgtgatgttttatgcctgctcg
ctagatcctgtgaactatggtgaaagatttgcgaacatgcttctcgatatttataaaaac
agcatgtatgtcttggaatggagaatgggagctgtttcttaccttgcaagttacctgtct
cgtgcaaatttcatgtcagcgtcatttgtagtctccgtactggaaagtctggtagattgg
tgtttcacttactgcaaaggccataatggtgaaactaatcccaaagctcatagagtcttc
tactctggaattcaggctattatgtatattctttgtttccgtatgagatcagtgctgggt
gttcctcgtattgaatcacagctctctcttttgcctatacaagcaattttgaagcactca
ttgaaccctttaaaggtatgcttgccatcaatagtgcacgaatttttgcagcaggccaga
gcagctcagctatttagcgtctcagaagatttccatttatatggggtgctggaatcagaa
gtctctgctgactttggtggtttagaaagacttgacatgttctttccctttgatccatat
ctgttacaaaattccgacagattcatacggccaaacttcatattttggtcaatggtgaga
acgacttatgaggatgacgacgaagatgaagatgaagatggtgatcaaagtgagggtagc
actgatgaagatattgagaatgatagcagagatgatgatagaatagccatgagttttgag
gatgatctagctatagatgaatttgacaattccttgaataaaatgtctatcactccaaaa
aattacaatggagcccaattacaaggatacaagcaaatgccctcacgaattagaccttct
gcaagtccagtatctttgtaa
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