Daucus carota (carrot): 108209120
Help
Entry
108209120 CDS
T05350
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 6-like
KO
K11843
ubiquitin carboxyl-terminal hydrolase 14 [EC:
3.4.19.12
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dcr01002
]
108209120
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108209120
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108209120
Peptidases and inhibitors [BR:
dcr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108209120
Ubiquitin system [BR:
dcr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108209120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
ubiquitin
Peptidase_C98
Motif
Other DBs
NCBI-GeneID:
108209120
NCBI-ProteinID:
XP_017235358
LinkDB
All DBs
Position
2:35720355..35728161
Genome browser
AA seq
483 aa
AA seq
DB search
MPTVSVKWQKELLTGVEIDTSQPPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDADWSKL
GVKEGQKLMMMGTADEIVKAPEKGPVFMEDLPEEEQVVVAGHSAGLFNLGNTCYMNSTLQ
CLHSVPELKSALIKYPHSGRSNDLDQPSHLLTVATRDLFSELDKSVKAVAPMQFWTVLRK
KYPQFGQLHNGSFMQQDAEECWTQILYTLSQSLKTPNLSENLDAIKGLFGIELVSRVHCA
ESGEESSETESVHSLKCHISHEVNHLHEGLKHGLKSELEKSSPSLGRSAIYVKDSHINGL
PRYLTVQFVRFFWKRESNQKAKILRKVDYPLELDIYDLCSDDLKKSLEVPRQILRDEEGK
KLGLKSKPKSSSSTVNDVKMSDAEGSSKESGESSMDASEEGGVHDKEMQLTGVYDLVAVL
THKGRSADSGHYVAWVKQESGKWIQYDDDNPIPQREEDIVKLSGGGDWHMAYICMYKARV
VPK
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgccgacagtgagtgtaaaatggcaaaaagagctgcttacgggtgtggaaattgatact
agccagccaccatatgttttcaaatgtcagttgtatgacctaacaggagtacctcccgaa
agacagaagattatggtgaaaggtggtttattaaaggatgatgccgattggtcaaaatta
ggggtaaaagagggccagaagttaatgatgatgggaacggctgatgagattgtgaaggca
cctgagaagggccctgtttttatggaggaccttccagaagaagaacaagttgttgttgcg
ggtcattctgctggcctgtttaatcttggtaatacctgctacatgaactccactctgcag
tgcttgcattcagttccggagctgaagtctgccttgatcaagtatccgcattctggtaga
agcaacgatttagatcagccatctcatctcttgaccgttgcaacacgggatttgtttagt
gaacttgataaaagtgtcaaggcagttgcaccaatgcagttttggacggttttaagaaaa
aagtatccccaattcggccaacttcataatggctcctttatgcaacaggacgctgaagaa
tgctggacgcaaatcttgtacacactttctcaatctcttaaaacaccaaatctgagtgaa
aatcttgatgcgatcaaggggctttttggaattgaacttgtaagcagggtgcactgtgca
gaaagtggtgaagaaagctctgagacagagtcagttcactctttaaaatgccacatatca
catgaggtcaaccacttgcacgaagggttaaagcatggcctgaagtcagaattggagaag
tcttctccttcactgggtaggagtgcaatttatgtgaaagattcacatatcaatggattg
ccaaggtacctaacagttcaatttgtccgttttttctggaagagggaatcaaatcagaaa
gctaaaattttgcggaaagtagattatccgttggagctggacatctatgatctgtgttca
gatgatctaaagaaaagtttagaagtccctcgtcagatattaagagacgaggaaggtaaa
aagcttggtttgaaatctaaaccaaagagctccagttcaacagtaaacgatgtcaagatg
tctgatgctgagggttcatcaaaggaaagtggtgaatcatcgatggacgcttctgaagaa
gggggagtgcatgacaaagaaatgcaactgaccggagtatatgatctggtcgctgtgctg
acccacaagggtagaagtgctgattctgggcattatgttgcttgggtgaagcaagaaagc
ggtaaatggattcagtatgacgatgataatcctattcctcaacgagaggaagatattgta
aagctttctggaggaggtgattggcatatggcttacatctgcatgtacaaggctcgtgtt
gtccccaagtaa
DBGET
integrated database retrieval system
