KEGG   Daucus carota (carrot): 108209141
Entry
108209141         CDS       T05350                                 
Name
(RefSeq) splicing factor-like protein 1
  KO
K13095  splicing factor 1
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108209141
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dcr03041]
    108209141
Spliceosome [BR:dcr03041]
 Complex A
  Other components
   Complex A specific factors
    108209141
SSDB
Motif
Pfam: SF1-HH KH-I_KHDC4-BBP RRM_1 KH_1 zf-CCHC KH_12 RRM_5 KH_PNO1_2nd zf-CCHC_6 PHD_4
Other DBs
NCBI-GeneID: 108209141
NCBI-ProteinID: XP_017235390
UniProt: A0A161XK71
LinkDB
Position
2:complement(57799866..57803765)
AA seq 799 aa
MESQTLISQSPLDPPPTQSNRSESPPIYDHQLKQEQNPQPTESNSSEFPPSHGQYPVQVK
QEHATESNSSELPPSHGEIPIKVKQEQTTESNSSELPASHEQKPIEVKQEQGVSENNGSG
ENNSNRRRRRSRWDPQPEDGSGETKKRKSRWADDEPKPIIQLPDFMKDFAQGIDTDPEIQ
LLNARLLEISKILQAGVQLDDRPEGARSPSPEPVYDNLGIRINTREFRARERLNKERQEI
IAQIIKRNPAFKPPADYRPPKLHKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAK
IVIRGKGSIKEGRFGQKRDLKFDPAENEDLHVLVEADNEKSLEEAAGMVEKLLRPVDEGL
NEHKRQQLRELAALNGTIKDEEFCRLCGEAGHRQYACPSRLTTFKSEVLCKNCGDGGHPT
IDCPMKGAAGKKMDDEYKNFLAELGGTMPESSTTTKESTPLAIMGSSNTGSNPPWASSNG
SGNVGASLHPGLGSTVAKIGKEIDDTNLYIGYLPPTMDDDELIRLFQPYGDIVMAKVIKD
RVSGLSKGYGFVKYSDVAQANQATASMNGQRVDGRVIAVRVAGKPPPPVVPPGPPAPPVS
AYPGQNQGYNGYPPPQMQSGAPPGTGPPGTYIVAPVPWGPPPPPAYAAYPPPPPGSNVYS
SYPPPPMPPYGMQYPPVTQVAVSGAPAQTFSPAESQQSYSAGMQYPSSAPASNVIYGNSP
VGMPPNSQPPYPASSVGYPSYYTGIPPPPDATQSLVEQQSLASAPWAANPPPPPPPPAMP
STEPTPPDSEYEKFMAEMK
NT seq 2400 nt   +upstreamnt  +downstreamnt
atggaatcccaaaccctaatttctcaatcccctctcgatccgcccccaactcagtcaaat
cgctccgagtcgccgccgatttacgaccaccagctcaaacaagagcaaaatccccaacca
acggagtcgaactcgtccgagttcccaccgagtcacggacaatatccggttcaggtgaaa
caagaacacgcaactgagtcgaactcgtccgagttgccaccgagtcatggagaaattcct
atcaaggtgaaacaagaacaaacaaccgagtcaaactcgtccgagttgccagcgagtcat
gaacagaagccaattgaggtcaaacaagagcaaggagtctctgagaataacggtagcggc
gagaataacagcaatcgtcggcggaggaggagcaggtgggacccgcagccggaggatggg
agcggagagacgaagaagaggaagtcgagatgggcggacgacgagccgaagccgataata
caattgcctgatttcatgaaggatttcgctcaaggtatcgatacggaccctgaaattcag
ttattgaatgctaggctacttgaaattagtaagattttgcaagctggtgtgcaattagac
gatcgtcccgagggcgctaggtcaccttctcccgagcctgtttatgataatttaggtatt
aggattaataccagagagtttcgagctagggagaggcttaataaggagaggcaagagata
attgcgcagattattaagaggaatcccgcatttaagcctcctgcggattataggccaccg
aagttacataagaagttgtatattccgatgaaggagtatccggggtataattttataggg
ttgattattggaccgagagggaatacacagaagaggatggagaaggagacgggggcgaag
attgtgattagggggaaggggtcgattaaggaggggaggtttgggcagaagagggatttg
aagtttgatccggcggagaatgaggatttgcatgttttggtggaagcggataatgagaag
tcattggaggaggctgctgggatggttgagaagttgttgaggccagttgatgaagggttg
aatgaacataagaggcagcagcttagggaacttgcggcgttgaatgggacgattaaggat
gaggagttttgtaggttgtgtggtgaggcgggccataggcagtatgcttgtccatcgagg
ttgacgacttttaagagtgaggtgttgtgtaagaattgtggtgatggtggacatccgact
attgattgtcctatgaaaggtgcggctgggaagaaaatggatgatgagtataagaatttc
ttggcggagctgggggggactatgccagagtcttctactactactaaagagagtacacct
ttggctattatgggttcaagtaacaccggaagcaatcccccttgggctagcagcaacggt
tctggaaatgttggggcctcactacatcctggattaggaagcactgtagctaagattgga
aaagagattgacgacacgaatttgtatattggttacttgccaccgactatggatgatgat
gaattgataagactgttccaaccttatggagatattgtaatggccaaggttatcaaagat
agagtgagtggattaagtaaaggttatggttttgttaagtattctgatgttgctcaggcc
aatcaggcaactgctagcatgaatggtcaacgcgtagatggaagagtaattgctgttaga
gtggcaggaaaaccacctccacccgttgtaccccctggacctcctgctccacctgtttct
gcttaccctggtcaaaaccagggatataatggatatccacctccacaaatgcaatcaggt
gctccacctggtactggaccacctggaacttacattgttgctccagttccttggggtcct
cctccacctcctgcttatgctgcttaccctcctccccctcctggatcaaatgtgtactcc
tcatacccacctccaccgatgcctccctatgggatgcaatatcctccagtgactcaagtt
gccgtctctggggctccagcccaaaccttcagtcctgcagaatcccagcaaagctattct
gctggaatgcaatatccgagcagcgcacctgcatctaatgttatatatggaaattcacca
gttggcatgccacctaattcgcaaccaccttaccctgcatcttctgtgggttacccctcc
tattatacaggaattcctccacctccggatgcgacccaatctttggtggaacagcaaagt
cttgcaagtgctccatgggctgcaaacccaccaccgcctccacctccacctgccatgcca
tctactgaaccaactccaccagactctgaatatgagaagtttatggctgagatgaaatga

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