Daucus carota (carrot): 108209223
Help
Entry
108209223 CDS
T05350
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC108209223
KO
K20547
basic endochitinase B [EC:
3.2.1.14
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00520
Amino sugar and nucleotide sugar metabolism
dcr01100
Metabolic pathways
dcr04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
108209223
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
108209223
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
108209223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_19
Chitin_bind_1
Motif
Other DBs
NCBI-GeneID:
108209223
NCBI-ProteinID:
XP_017235516
UniProt:
A0AAF1AP85
LinkDB
All DBs
Position
2:complement(39387945..39398148)
Genome browser
AA seq
634 aa
AA seq
DB search
MRFWIVTVCIFALSFASSAEQCGKQAGNALCPNGMCCSEFGWCGTTPDYCSDTCQSQCGG
STPAPGGGSTPTPSGGSGDVSSIIPESLFNDMLKHRNDGSCKSNGFYTYSAFINAAQSFD
GFGTTGSTDQRKQELAAFLAQTSHETTGGWASAPDGPYSWGYCFIAERNNPGTFCTSPDW
PCASGKEYYGRGPIQLTHNYNYGQAGKAIGADLINNPDLVATDAVISFKTAIWFWMTPQS
NKPSSHDVITGKWSPSADDNAANRVPGFGVITNIINGGLECNKGTDSRVEDRIGFYKRYC
DILGVGYGNNLDCNSQRPFAXSIFNLSMVLICILAFSLAVSAEQCGKQAGNALCPNGMCC
SQFGWCGTTAEYCTKCQSQCGGSKPVPSGGSGDVGSIITESVFNDMLKHRNDGNCKSNGF
YTYRAFINAAKSFNGFATTGNTDQRKREVAAFLAQTSHETTGGWASAPDGPYAWGYCFIA
ERNNPGTFCTSADWPCAPGKQYYGRGPIQITHNYNYGQAGKAIGVDLINNPDLVATDATI
SFKTAIWFWMTPQGNKPSSHNVITGRWSPSAADNAANRVPGFGVITNIINGGLECNRGTD
NRVQDRIGFYKRYCDILRVGYGNNLDCNNQRPFA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgagattctggatagttacagtctgcattttcgctttgtcttttgcaagttctgcagaa
caatgtggaaaacaggcagggaatgctttatgcccaaatggaatgtgttgcagcgaattc
gggtggtgtggcaccacacctgattactgcagcgatacctgccagagtcagtgtggtggt
tcaacacctgcccctggtggtggttcaacacctacccctagtggtggaagtggggatgtt
agttctatcattcctgaatctcttttcaatgatatgcttaaacatcgaaatgatggaagc
tgtaagagtaatggtttctacacatacagtgcttttataaatgcagcgcaatctttcgat
ggttttggtactactggaagcactgaccagcgtaaacaagaacttgcagctttcttggct
cagacgtctcacgaaactacaggtggatgggcaagtgcaccagatggtccatattcatgg
ggatattgttttatagcggagagaaacaatccgggtacattctgcacttccccagactgg
ccttgtgcttctggcaaagaatactatggcagaggaccaatccaactcactcataactac
aattatggccaagctggaaaagcaattggagcggacctcataaataatcctgatttagta
gctacagatgcagttatatcctttaagacagctatatggttctggatgactccacaaagc
aacaagccatccagccatgatgtgatcaccggaaaatggtctccttctgcggatgataat
gcagcaaaccgtgtccctggctttggtgtgattaccaatattataaatggtggacttgag
tgcaacaaagggactgatagtagagtggaagatagaatcggtttttacaagaggtattgc
gatatcctaggagttgggtatggaaataatcttgattgtaatagtcaaaggccatttgcc
tgatctattttcaatctttcaatggttttgatctgcattttggctttttctttggctgtt
tctgcagaacaatgtggaaaacaagccgggaatgctctgtgcccgaatggaatgtgttgc
agccaattcgggtggtgtggcaccaccgctgagtactgtactaagtgccagagtcagtgt
ggtggttcaaaacctgtccctagtggtggaagtggggatgttggctccatcattaccgaa
tctgttttcaatgatatgcttaaacatcgaaacgatggaaactgtaagagtaatggtttc
tacacatacagagcatttattaatgcagcaaagtctttcaatggttttgctactactgga
aacactgaccagcgtaaaagagaagttgctgctttcttggctcaaacgtctcacgaaact
acaggtggatgggcaagtgcaccagatggtccatatgcatggggatattgctttatcgcg
gagagaaacaatccaggtacattctgcacttctgcagactggccttgtgctcctggcaaa
caatattacggcagagggcctatccaaatcactcataactacaactatgggcaagctgga
aaagcaatcggagtagacctcataaacaatccagatctagtagctacagacgcaaccata
tcattcaagacagctatatggttttggatgactccacaaggtaacaagccatcaagtcac
aatgtgatcaccggaagatggtctccttctgctgcagataatgcagccaatcgtgtccct
ggctttggtgtgatcaccaatattataaatggcggacttgagtgcaatcgagggactgat
aatagagtacaggatagaatcggtttttacaaaaggtattgtgacatcctcagagttggg
tatgggaataatcttgattgtaacaatcaaaggccttttgcttga
DBGET
integrated database retrieval system
