Daucus carota (carrot): 108209255
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Entry
108209255 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108209255 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108209255
03036 Chromosome and associated proteins [BR:
dcr03036
]
108209255
Enzymes [BR:
dcr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
108209255
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
108209255
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108209255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
108209255
NCBI-ProteinID:
XP_017235551
UniProt:
A0A166D5G2
LinkDB
All DBs
Position
2:complement(31033178..31051306)
Genome browser
AA seq
1835 aa
AA seq
DB search
METSIDSLLNSFRRVPPAAIPAMFDCILCLTPSSPSTLFFSLLDAFPQSTKEIDWSEKLD
PEHRNYVGSYVSALCYLLKKSGDNMAAVQSFIWRILITLMKLAYLNNREAITQALGSFFD
LVIETSSWAVVEATIVTYLLRAIGCSMGMPQSADLAICTWTVEPVDANEQLADFEIIEDR
MPSHRSSFPLPLSCQLLTSILDAALQCKDAQKNTSALILESGRIAEIFALNLLWDLCNLT
VTMVLQSQEHRSCAIKYLLPVMFKSFNSRCVSEITVRGQTCLLSRKQFLIKIWNCCKTLF
SLGSLERRDGYTILSLYISFFSFIERCDNADTGVSQVFDLRTEMEFWDEIKRGLVDKESL
VRKQSLHILKASVLKREKNQHLSGVSENLSSDITSAIQTMTKKGRWADKEAKSLGVGMVC
SSADSGSDSQQKWDAFFLLYEMLEEYGTHLVEAAWNHQIALLLCISSSYLSSPNPGTARV
LPAKMETLEEVFNWLAVLWDRGFCHDNPQVRCLIMESFLGIEWKNSGNCANLVPEDFVLG
PFIQGLNDPVHHKEFGIKGIYSSKTIEGAAQFLSQYTSHLSSRHKIAFLNSLASVAKKYS
FGRTGLMSLAECIAYAACGDQTCKSDKFEHSGDDISRSNQTRNALDIKSYNYKEELLDVL
RFVMESSRQHFNPNYRLKVCEKVLHAAASVVSVFDVSLEFLLQFISSLPQDSTNYGGPLR
VKVQEWLWAYDENQYTSVDQINRQVLKRLDDFPANFIKNHYLEHGCVNYDDEDLEVWEVE
AKRWARMLFLVIKEEHHLYPTLMFIQNHGRDLRTQTNHLEWVPVKFHILILALINEFQAM
YRITAESGTNRRTDLCLNGNAGDRNSEQAIELIEKLIKSLFGTLENLISFAQSSCSILWS
RVAKDDTDMPSSIKGRLGGRTQRRLSVSTTTVILQAIISIKSIASITSFVAKLGSEDTLN
SAFMYLWELFWNIIQSPECNSETEAEICIGAFEALCYILKAIVSVSSTLSLELVMESFKI
SSPKCQDEPILDYLFETFLGSINNIIGYAELVRSRRAVLMNWKWICLESLLQIPNYAVQK
GDYSNLSCSLLSDAMTRHIYGDLVESLENAGEGSVLPMLRSVRLLLQLFSIGRMGHVVSS
CSGMDAQMMWNLVRSSWILHRSCNKRRVAPIAALLSSVLHHSVFNDKSMHEVDNAAGPLK
WLVEKILEEGVRSPRTIRLAALHLTGLWLLYPNTIKYYIKELKLLTLYGSVAFDEDFKGE
LNENVDARSEISLLAASPDPELTEVFINTELYARVSVAVLFNKLADLAHTSVSNHEYEKG
CVALEAGKLFLLELLDSAVNDKDLGKELYKKHSAIHRRKVRVWQMICILSRFVDHDIVHK
VTSSLHIALYRNNIPGVRQYMETFAIFIYLKFPLLVGEQLAVLLRDYDMRSQSLSSYVFI
AANVILHSSEAVWYNNLNELLPPVIPLLTSHHHTLRGFTQLLVHQVLSKFSSALDSSTET
ISLEKRCFLDLKSFLEGNSDCTKLRSSMEGYLSDFNPEISASPVGIFSNRVSEVEFECVP
KSLMERVIDFLNNVREDLRFSMAKDAAALKNENFQVNGGPDNDGFSVNVNKEDLVTNMRK
DMLPDFQKKVTFSKNGWDDTNSNFLGDDGTYESLVDMENEEQLLNQVLQSRSLAADKSKS
GRQQIILVASLLDRIPNLAGLMRTCEVFKASALAIGDANVLHDKQFQLISVTAEKWVPTI
EVPTSSVKLFLEKKQQEGFSILGLEQTANSIPLDKFVFPKKSVLVLGREKEGIPVELIHI
LDACIEIPQLGIVRSLNVHVSGAIALWEYTRQQRS
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atggagacttcaattgattctctacttaatagtttccggcgagttcctccggctgccatt
ccggcaatgttcgactgcattctgtgtttaactccttcatctccgtccactctcttcttc
tcgcttctcgacgcttttccacagtccactaaggaaattgactggagcgagaaattggat
cctgagcaccgcaactatgttggttcgtacgtgagtgcgttgtgttaccttttgaagaaa
tcaggggacaacatggctgcagttcaatcctttatttggaggatcttaattactttaatg
aaattggcatatcttaataatcgtgaagctatcacccaggccctaggttcattctttgat
cttgttattgaaacaagcagctgggcagtggtagaagcaaccatagtaacatatcttcta
cgagcaattggttgttctatggggatgcctcagagtgctgacttggcaatttgcacatgg
acagtggagccagtagacgctaatgagcagctagctgactttgagataattgaagaccgc
atgccttctcatcgcagttcctttccattgcctttgtcatgccaactcttaacctctata
ctagatgctgctctgcaatgtaaagatgctcaaaagaatacctctgcgttaattttggag
agtggacgcattgcagaaatatttgctttaaatctgctttgggatctctgtaatttaact
gttacaatggtgctacagagtcaggagcatcgttcttgtgcaattaaatatcttcttcct
gtcatgttcaagtcatttaattcacgctgtgtttctgagatcacagttcgcgggcagact
tgcttgttatccaggaagcaatttcttataaaaatatggaattgttgcaagactctattt
tctttggggtctttggagagaagagatggatacactattctctccctgtatatatctttt
ttctcttttatagaacgatgtgataatgctgacacaggggtatcacaagtatttgacctt
aggacagagatggaattctgggatgaaatcaagagaggcttggtggataaagaaagctta
gtgaggaagcagtcattgcatattttaaaggcgtcagtactgaaaagggagaaaaatcag
catctttctggtgtttcagaaaatctgtcgagtgatataacttcagctattcaaacgatg
acaaagaaagggcggtgggctgacaaggaagccaaatcattgggggtaggaatggtttgc
agttcagctgattctggttcagatagccagcagaaatgggatgcattctttcttctatat
gaaatgcttgaagagtatggtacccacttggttgaagcagcatggaatcaccagatagcc
ttgttgctctgtatatcttcatcgtatcttagttctccaaatcctggtactgcaagggtt
ttacctgccaagatggagacactggaagaagtatttaattggttagctgtgttatgggat
agaggcttctgtcatgataatcctcaagtacgctgtctgatcatggagtcatttttgggc
attgaatggaagaactctggcaattgtgcaaatttagtacctgaagattttgtacttggt
ccattcattcaagggctaaatgatcctgtgcaccataaagagtttggtataaaaggcatc
tattcttcaaagacaattgaaggcgctgcccaatttttaagtcaatataccagtcatcta
agttcaaggcacaagatagcatttttgaacagtttagcatctgttgcaaagaaatattct
tttgggcgaaccggattaatgagcctggcagaatgcattgcttatgctgcttgtggggat
cagacatgtaagagcgacaaatttgaacactctggtgatgacatctctaggagcaaccaa
accagaaatgcacttgatattaaatcttataattataaagaagagttgctggatgtttta
agatttgttatggagagcagcagacaacatttcaatcctaattaccggcttaaagtttgt
gagaaagttttgcatgctgctgcatccgtggtttctgtgtttgacgtctcccttgagttc
ctccttcaatttatttcaagtctgccacaggactctactaattatggtggtcccttgaga
gtgaaagtacaagaatggctttgggcatatgatgagaaccaatatacttctgttgaccag
atcaatcggcaagtattgaagaggttggatgatttccctgcaaattttataaagaaccat
tatctagagcatggctgtgtaaattatgatgacgaagacttggaagtgtgggaagttgaa
gcaaaaagatgggcaagaatgctctttcttgtaatcaaggaggaacaccacctatacccc
acattaatgtttatacaaaatcatggcagagaccttcgcactcagaccaatcacttggaa
tgggtacctgtgaaatttcacatcctcatcttggcactaataaatgaatttcaagcgatg
tacaggatcacagctgaaagtggtaccaataggcgaacagatctttgcttgaatggaaat
gcgggtgatcgaaattccgaacaagcgatagaattaattgagaagctcatcaaatcccta
tttggtacattggagaacctgatttcatttgctcaatcttcttgttctattctatggtcc
cgcgtggccaaggatgatacagacatgccgtcttccataaaaggaaggcttggaggtcga
actcaacgtcggttatcagtttcaaccacaactgttattctgcaagctataatatccata
aagtctattgcatctatcacatcatttgttgccaagcttggaagtgaagatacactcaac
tcagcttttatgtatctctgggaactcttttggaacattattcaatctccagaatgtaat
tcagagactgaagcagaaatttgtataggagcatttgaggcattatgttatatcttgaaa
gcaattgtatctgtctcgtctactctatctttggagttagttatggaaagtttcaaaatt
tcatcgccaaagtgtcaagatgaacctattttggattatctttttgagacttttcttgga
agcatcaataatattattggatatgcagaattggttcggagtcggcgagcagttttgatg
aactggaagtggatttgcctagagtctttacttcaaatcccgaactatgctgttcaaaaa
ggagattactcaaacttatcttgttctctcctctccgatgccatgaccagacatatttat
ggtgatcttgttgagagcctagagaatgctggcgagggttctgttctgcctatgctaaga
tcagtcagattgcttttgcagctattttctataggacgaatgggtcatgttgtatcatcg
tgttctggaatggatgcccagatgatgtggaacttggttcgttcttcttggatattacac
agaagctgtaacaagcgaagggttgcacccatcgctgcactcttgtcatctgttttgcat
cattcggtgtttaatgacaagtccatgcatgaagttgataatgcagcaggaccattaaag
tggcttgttgagaaaattctagaagaaggggttcgaagtccacgaactatacgtcttgca
gcattacatctgacaggcctttggctcttatatcccaatacaataaagtattacataaaa
gagttgaagctattgacgctttatggatctgttgcttttgatgaggattttaaaggcgag
ttgaatgaaaatgttgatgctagaagtgaaatatcactgttggctgctagtccagatccg
gagctgactgaagtatttatcaatacggagctttatgcacgggtatctgttgctgtatta
tttaataagctagcagacttggcgcatacatcggtatcaaaccatgaatatgaaaagggt
tgtgttgctctcgaagctggcaaattatttttgttagagcttcttgattctgcggtaaat
gacaaagatctcgggaaggagctgtacaaaaaacatagtgcaattcacagacgcaaagtc
cgtgtgtggcagatgatatgcatactttctcgatttgttgaccatgatattgtccataaa
gttacaagtagtctgcatattgccctctatagaaacaatatacctggtgtgcgacagtac
atggaaacttttgcaatctttatatatctaaagtttcctttgctggttggggagcaactg
gccgtgttgcttcgcgattatgatatgaggagtcaatcactctcatcatacgtgtttata
gcagctaatgttattcttcattcctctgaagcagtttggtataataacttgaatgaattg
cttcctcctgtgattccattgttaacttcacatcaccacacgttacgtggttttacacag
ttattggtccaccaagtcctttccaaattttcatctgccttggattctagtactgagacc
atttcacttgagaaaaggtgctttttggatttgaaatctttcttagagggtaacagtgat
tgcacaaagttaagatcatcaatggagggctatctaagtgattttaatccagagatatct
gccagtccagttgggatcttcagtaatcgagtgagtgaggtggagtttgaatgtgttcca
aaatccctgatggaacgagttattgacttcctaaataatgtaagggaagatcttagattt
tctatggccaaggatgcggcagctctaaagaacgagaattttcaggttaatggaggtccc
gataacgatggattttcagtaaatgtaaacaaagaagatttagttactaatatgcgtaaa
gacatgttgcctgatttccaaaaaaaagtgactttctcgaagaatggatgggatgacact
aattccaattttttgggtgacgatggaacttatgaatcacttgtcgacatggaaaatgaa
gaacagcttcttaatcaagtactgcaatcaagaagcctggctgcggacaaatcaaagtca
ggtcgacaacaaattatcctagtggcatccctacttgatcgcatacctaaccttgctgga
ttaatgcggacttgtgaagtgtttaaagcatctgctttggccattggtgatgcaaatgta
ctacacgacaagcagtttcagctcatcagtgtgacggcagaaaagtgggttcccactatc
gaggtgccaacgagcagtgtaaaattattcttggagaagaaacagcaagaggggttttct
atactgggtctagagcaaacagccaacagcatacctctcgacaagtttgtatttcctaag
aaatcagttctggttcttggtcgtgaaaaggaaggaatacctgtggaattaattcatata
ttggacgcctgcattgaaatcccacaactagggattgtcagatcactcaatgtccatgtt
agtggtgccattgcgctttgggagtatactcgacaacaaagatcttag
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integrated database retrieval system
