Daucus carota (carrot): 108209269
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Entry
108209269 CDS
T05350
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
KO
K13098
RNA-binding protein FUS
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03015
mRNA surveillance pathway
dcr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108209269
09122 Translation
03015 mRNA surveillance pathway
108209269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108209269
Spliceosome [BR:
dcr03041
]
Complex A
Other components
Complex A specific factors
108209269
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
108209269
NCBI-ProteinID:
XP_017235577
LinkDB
All DBs
Position
2:49071479..49077955
Genome browser
AA seq
440 aa
AA seq
DB search
MSGMYGHEGDGSAPPSYGGGGYGGGGGYGGSRDAGGYGGGNRGGYDGSGGGGGYGGGGGR
DGGGGGYGNRGGGGGRGGGGGGYGGNSQSRGGGYQGGSGGRGGGRGGGGSGRDGDWRCPN
ASCGNMNFARRDKCNKCGAPSPAGPGDSHGSDGGNYSRGGGGGGRYGDSRGKGDNYDSGR
GSASYGGRDGGGYNQSAPSYGGSGNNYPPPSNSYNANPIYDADNAVPPPTSYTGGPTSYP
PSYGASTGYGGDANSDSRGGGRGGPPGGQRNDGGLYGAPPVTEEKVKQCDDKCDDTCDNA
RIYISNLPPDVTVDELQNLFGGIGQVARIKQKRGYKDQWPWNIKIYTDEKGKSKGDGCVV
YEDPSAAHSAGGFFNNYEMRGYKITVGMAEKSAPRPAPAHGQGGGRGGGGGRGGYGGGGR
RDNYGGPDRNNRGGNRSNPY
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtatgtacggtcacgaaggcgacggatctgctcctccgtcttacggcggcggc
ggatatggaggcggagggggatacggaggcagccgtgatgctggaggttacggcggaggt
aatagaggaggttacgatggcagtggcggcggcggaggttacggcggtggcggaggtcgt
gatggcggtggaggaggttatgggaatcgaggcggcggaggtggcagaggcggcggcggc
ggaggatatggtggtaattcacaaagtagaggtggtggatatcaagggggaagtggtggc
agaggaggtggccgtggcggtggaggaagtggcagggacggagattggcgttgccctaat
gccagctgtgggaatatgaattttgcgagaagagacaagtgtaacaagtgtggtgcaccg
tctccggctggtcctggtgatagtcatggcagtgacggtggcaattacagcagaggtggt
ggtggtggtgggagatatggtgatagcagaggtaaaggtgataactatgacagtgggaga
ggtagtgcgtcttatggaggaagagacgggggtggttataatcaaagcgctccatcttat
ggtggctctggcaacaactacccaccaccatcgaactcttacaatgcgaaccctatttac
gatgctgataatgcagttcctccaccgacaagctatactggtgggcctacatcgtatcct
ccatcatatggcgcttctactggttatgggggtgatgctaattctgactctcgtggtggt
ggtcggggtggaccacctggtgggcaacgtaatgatggtggtctgtatggcgctcctcct
gtaactgaagaaaaagtgaagcaatgtgatgataaatgtgatgatacctgcgacaatgct
agaatttacatatctaatttgcctccggatgtcaccgttgatgaactgcaaaatctcttt
ggaggaattggacaagttgcaagaatcaagcaaaagagaggctacaaggatcagtggccc
tggaacattaaaatatacacagatgaaaaaggaaaatccaaaggcgatggttgtgtagtc
tatgaagatccttctgcagcccattctgctgggggcttttttaataattatgaaatgaga
ggctataaaatcactgttggaatggctgagaagtcggcaccaagacctgctcctgcacat
ggtcaaggaggtggaagaggaggtggaggtgggagaggtggctatggtggtggtggacgc
agagacaactatggtggtccagataggaacaaccgtggcgggaaccgttcaaatccatac
tga
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