Daucus carota (carrot): 108209357
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Entry
108209357 CDS
T05350
Name
(RefSeq) KH domain-containing protein At4g18375
KO
K21444
poly(rC)-binding protein 3/4
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108209357
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
108209357
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
108209357
NCBI-ProteinID:
XP_017235698
UniProt:
A0A166EW43
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All DBs
Position
2:complement(53284864..53290550)
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AA seq
631 aa
AA seq
DB search
MVEKGKRYHSRSERNYEGDNRNPKRRTHDRDERVSNDELIVYRILCPDRVIGSVIGKSGK
VINAIRQDSRAKVKVVDPFPGAKDRVLTIYCYVREKVDVEVDNEFDDTEPLCAAQEALLM
VHTVISNAVASLSDPYKKDSDKEECQILVPASQSANIIGKSGSTIKKLRGKTRTNIRVTS
KDASDPTHSCAMHFDNFIQITGESEAVKKALFAISAIMYKFGPKEDISLDTTVPDIHPGI
IIPSDVPVYPAAGLYPGLDSIVNSRSLPSILSATPVPELSHYADTAQTWPVYSSSVPVVS
GYGGASRSEELIIKVLCSSSKIGRVIGKLGASIKSVRQTSGARVDVDDKKTDNNDCTITV
TSTEKLDDMKSMAVEAVLLLQEKINDEEDDTISIRLLIPSKVIGCIIGKSGSIINEIRKR
TKADVRISKGDKHKRADDSSEVVEVVGEVSSVRDALVQIVLRLRDDVLRDREGNRNPDGA
GHGSLYPGSTSLSMPQVLPSIPPVGHAGYEQQRGDGGSGLSMLSSDSFYGYGSLPMGDSG
YGSLSSPYSSKLYGSGLPPPTDLEMVVPAHAVGKVMGKGGANIDNIRKLSGADVDISHPK
SSRGDRVALISGTPEQKRSAENMIQAFIMST
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggttgagaaaggcaaacggtatcattctcgatccgagaggaattatgaaggggataat
agaaatccaaagaggcggactcatgatagagatgagagggtgagtaatgacgagctgatt
gtgtataggatactgtgccctgacagggtgattgggagtgtgataggaaagagtggaaaa
gtcataaatgcgatcaggcaggattcgagggccaaagttaaagtggttgatccatttcct
ggtgccaaggatagagtattaactatttattgttacgtcagggagaaagtagatgtggaa
gttgacaatgaatttgacgatacggagcctctctgtgctgctcaggaagctctcctaatg
gtgcatactgtgatttcgaatgctgtggcgtcgcttagtgacccttacaagaaggattca
gataaggaggagtgccagattcttgtgccagccagccaatcggcaaatataattggcaag
tctgggtctactatcaaaaaactgagaggcaagacaaggacaaatattagggtcacatcc
aaggatgcaagtgatcccactcattcttgtgccatgcactttgacaactttattcagata
actggtgaatcagaggcagttaaaaaggcactatttgcaatttctgcaatcatgtacaag
tttggtccaaaggaagatatttctctcgatactactgtaccagacatccatcctggcata
attattccttcagatgtacctgtgtatccagctgcaggactctatcccggtctagattct
attgttaattcaagatcccttccatccattttaagtgccacacctgtaccagaactttct
cattatgctgatacagcacagacgtggcctgtatattcatcttctgttcccgtggtttct
ggttacggtggtgcatcccgttcagaggaattaattattaaagttctgtgttcctctagt
aagattggccgtgttattggcaagttaggggcttcaattaaaagcgtgaggcagactagt
ggtgcaagggttgacgttgatgataagaagactgataataatgactgtaccatcactgtc
acttctacagagaaattggacgatatgaaatcgatggcagttgaagcagttttattgcta
caagagaaaatcaatgacgaggaagatgataccatatctattaggctgctaattccttct
aaagttattggttgtataattggcaaaagtggttcaattattaatgaaatcaggaagaga
acaaaggcggatgttcgtatctccaaaggagataagcacaaacgcgcagatgacagtagc
gaagttgttgaggttgttggtgaagtcagtagtgtgagggatgcgcttgtccagattgtt
ctcaggcttcgagatgatgtcttgagagacagggaaggaaatcgaaatccagatggtgct
ggacatggttctttataccctggtagcacaagtctttcgatgcctcaagttttgcctagc
attcctcctgttggtcatgcaggttatgaacagcagagaggggatggtgggagtggctta
agcatgctatcctcagatagcttttatggatatggatcattgccgatgggtgacagtggc
tatgggtctttgtcgtctccatattcatcaaagctgtatggcagcggattgcctcctcca
acagatcttgagatggtggttcctgctcatgcagtgggcaaagtgatgggcaaaggaggg
gccaatattgataacatccgaaagctttcaggagcagatgtagatatctcccatccaaaa
tcttcacgaggcgaccgtgtggctcttatctctggtacacctgaacagaagcgttctgct
gagaacatgattcaggcatttataatgtctacttaa
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