Daucus carota (carrot): 108209359
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Entry
108209359 CDS
T05350
Name
(RefSeq) probable galacturonosyltransferase 6 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00520
Amino sugar and nucleotide sugar metabolism
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
108209359
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dcr01003
]
108209359
Enzymes [BR:
dcr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
108209359
Glycosyltransferases [BR:
dcr01003
]
Polysaccharide
Structural polysaccharide
108209359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
DUF789
ARM_LIN
Motif
Other DBs
NCBI-GeneID:
108209359
NCBI-ProteinID:
XP_017235705
LinkDB
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Position
2:34992778..34998805
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AA seq
604 aa
AA seq
DB search
MKRFRRCSARRFILSLLAVCVVIPIFVLSQRLINLTSEASRSSIEDLSTIKFRNDILNLK
STDQGNDIDVNEPPSLVYKDENVSASSSDKEVKSEEVKSEERRYSGGIVTLSEKIGTMYE
AEENSQQDKTKSSFSSPEEKKVPNPRGDMFQQIRELRTPSGRVPVDRKVKEIKDQVIRAK
AYLNFAPPNSNSHLVKELKMRIKELEHAISDSTRDSNLSKRTLQRSSLMEVTLSKANRVY
PDCNAMVKKLRAMTYNAEELVRARKKETTFLVQLAGRTTPKGLHCLSMRLTAEYFALQPE
KRKLPRQNDLHDANSFHFALFSDNVLACSAVVQSTIATAREPERIIFHIVTDSLNLPAIS
MWFLLYDPGKATIEIQSIDQFKWLSNNIDITKQKEDSPDMRYTSALNHLRFYLPDMFPKL
DKILLLDHDVIVQRDLTELWNIEMMGKTNGAVQTCQVEEPSFRSMDMFINFSDPLLASKF
DVEACTWAFGMNIFDLQEWRRRKLTRNYEEYLLLGKKRPLWKAGSLPLGWITFYNNTVPL
DSKWHVLGLGYQSGVKQPDIDQAAVIHYDGMMKPWLDVGFEKYKPYWKRHINYSRPFLQQ
CNIQ
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgattccgacgatgcagcgcacggagattcatactctcgctcctcgctgtttgc
gtggtcattcctatctttgttctctcccagcgcctcattaatctcacttctgaagcatca
agatcaagtatcgaagatttgtccactattaagttcaggaatgatattcttaatctcaaa
tcaacggatcaggggaatgatatagatgttaatgagccgccttcgttggtgtacaaagat
gaaaatgttagtgctagttcttctgataaggaagtaaagtctgaagaagtaaagtctgaa
gaacgtagatatagtggaggcattgttaccctgtcagagaagattggaaccatgtatgag
gcagaagaaaatagtcagcaagacaaaacaaagagttcattttcttcgcccgaggaaaag
aaagtacctaatcctagaggagacatgttccaacagattcgagaattgcgaacaccatca
ggaagggttcctgtagatcggaaagtaaaggagataaaagatcaggttattagggccaaa
gcatacttgaattttgcaccaccaaatagcaactcccatttggtaaaggagttgaagatg
cgaatcaaagaattggaacatgcaataagtgattccacccgagattcaaacttatctaag
aggactttgcagaggtcaagtctaatggaggtgacattgtcgaaagccaatcgtgtatac
cctgattgcaatgctatggtcaaaaagctccgtgctatgacttacaatgcagaagaacta
gtccgtgcacggaagaaggaaacaacctttctagttcagcttgccgggaggactactcca
aaaggtcttcactgcctctctatgcggttaactgcagaatactttgcgcttcaacctgag
aagagaaagcttccccgccagaatgatttgcatgatgcaaattcgtttcattttgctctc
ttctcggacaatgtattggcttgttcagcggttgtgcagtcaaccattgctactgctagg
gaaccagagaggataatcttccatatagtaacagattctctcaatctaccagcgatctca
atgtggttcttgttatatgatcctggtaaagccacgattgagatccagagcatagaccag
tttaaatggctgtcaaataatattgatataacgaagcagaaggaagattctcctgacatg
agatatacttctgcactgaatcacctccggttctatctgccagacatgttcccaaagctg
gacaaaattctgcttctagaccatgacgtgattgtccaaagggacctaacagagctttgg
aacattgagatgatgggaaaaacaaatggtgcagtgcaaacttgtcaagttgaggaacct
tcatttcgtagtatggatatgtttattaatttttcagacccattgttggcaagcaaattt
gatgtggaggcatgcacatgggcatttgggatgaatatatttgatttgcaagaatggaga
agaagaaaattaacaaggaactatgaggaatatctgctactgggtaagaagaggccattg
tggaaagctggtagcttgcctttaggatggatcaccttctacaacaatactgtgccctta
gacagtaaatggcatgttctagggttggggtaccaatccggtgtcaagcagcctgacatt
gatcaggctgcagtgatacactatgatggtatgatgaagccatggctagatgttggattt
gagaaatacaagccatactggaagagacacataaactatagtcgaccatttttgcaacag
tgcaacatccaataa
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