Daucus carota (carrot): 108209408
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Entry
108209408 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108209408
KO
K17925
sorting nexin-13
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dcr04990
]
108209408
Domain-containing proteins not elsewhere classified [BR:
dcr04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
108209408
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
108209408
NCBI-ProteinID:
XP_017235776
UniProt:
A0AAF0WGU9
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Position
2:complement(50830154..50839716)
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AA seq
1136 aa
AA seq
DB search
MSTDKAPVTATELVEEAKKRIVLLSVCVVGLSYLMSLTSSSVLVNVPAALVLIIVLRYFA
LDFDMRRKAALYNSKPASANNHFQKKYEAPKFVSRNSEWRRKVNSPAVEDALDHFSRHLV
SEWVTDLWYSRITPDKQAPEELVRIINSVLAEIASRMRNIDLIDLLTRDVIRLFCAHLEL
FRACNVKIQKRQLGSLTIGQRDRELKYVLAAQNKLHPALFSTEAEHKVLQHLMEGLVSLS
FRPDDLHCSLFRYIVRELLSCAVMRPVLNLANPRFINERIEGVAMSSKKSDKVVVDAQQV
KSSESSKMSTVHISQSLDPSVKGVELVQVKKDQPNSSTDSIKAEDLNGGLSKDPLLSIGT
QSTRSWNSLPFNSQTSDGRCIQRHHSGGEWGDKLDVISRRKTEALAPEHFENVWAKGRNY
KKKEGADSSPLPVEQSTSVGLATPVDDPKSLSKYHGKSGAEKGIAARGSDTSSLGVASSG
VKKLYPSDNWSKSGHPRNGSPEEDNEDSVNSDDAESGSTSSFPTDDESSNITGLDTPSIK
VWDGRNNRNQSVTRIHHPLEISKGHKARKTSKGRVQSQRLVRSQSGRKKPRSSSQVSDVW
QEIERTSVSMEGQDILKPFTGQVNSDSSGGDSETESLGRTNSGATTSSSLSYISIPESHS
LASNTPVSSLLADSFLTLRCEVVCANIVKSGSSTFAVYSISVTDVENKSWSIKRRFRHFE
ELHRRLKEYPEYTFHLPPKHFLSTGLDVPVIRERCKLLDAYLKKLLQLPTISGSIEVWDF
LSVDSQTYSFSDSISIIETLSDDTSYDKKKEIGTSAKATRHTMDQKRGLPNSGMKEAVPQ
MRINHVTDLSRMNTINVPPIPPERQAKAVGKPLEDSGKRIDRLVQDKIHLDSKLGTTVKE
AEIYQSHPATEPHVDGGADPALPSDWIPPNLSVPILDLVDVLFQLHDGGWIRRKAFWVAK
QVLQLGMGDAFDDWLIEKIQILRRGSVVASGIRRVEQILWPDGIFLTKHPKRQRPTPSAS
SYSSPSGHPPSPLSSPKEDDIRRLDELQENEARRREQFVYELMIDKAPTALVGLVGRKEY
DHCAKDLYYFLQSSVCLKQLAFGLLELLLLSAFPELENHFRQLIEEKDKFGELQQS
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgagtacggacaaggcaccggtgacggcgacggagctggtggaggaagctaagaagcgg
attgttctactctccgtgtgtgttgtcggcctctcttatctcatgtctttaacaagctcc
tcagttttggtcaatgtgcctgccgctctcgtcttaattattgttcttcgctactttgcc
ctggattttgacatgcggaggaaagcagcattatacaacagcaaaccagcctcggcaaat
aatcattttcaaaaaaagtacgaggcaccaaaatttgtctctagaaattctgagtggaga
aggaaagttaattcgccagctgttgaggatgcactagatcatttttccagacatttagtt
tcagagtgggtgacagatctctggtattctcgcataactccggataaacaagctccagaa
gagcttgtgcgaattataaatagtgtgctggctgaaattgcaagccgcatgagaaacata
gaccttatagatcttttaacaagagatgtcattagacttttttgcgcccacctggaactt
ttccgagcatgtaacgtgaagattcagaagcgacagttggggtctttgactataggacag
agggacagagagttaaagtatgttctagctgcacagaacaaattgcaccctgcccttttt
tcaacagaagcagagcacaaggttctgcaacatctgatggagggtcttgtttcactatca
tttagacctgatgatctgcactgttctttattccgttacattgtcagggaacttctttcc
tgtgcagtaatgcgaccggtcttaaacttggctaacccaaggtttatcaatgaaaggatt
gaaggtgtggctatgtcatcaaaaaagtctgataaagtggtggtggatgcacagcaggtc
aagtcaagtgaatcctcaaagatgtcaaccgttcatatatctcagtctctagacccttct
gtaaagggtgttgaacttgtgcaagttaagaaggatcaacctaattcttcaacagatagt
attaaggcagaggatttgaatgggggactttccaaagatccattactttccattggcact
cagtcaactcgttcatggaattctttgccattcaactcccagactagtgatggaagatgt
attcagagacaccattctggaggagaatggggtgacaagttagatgtgatttctcgtaga
aaaactgaagccctggctccagaacattttgaaaatgtgtgggctaaaggcagaaactat
aaaaagaaggaaggtgcagatagttcaccattgccagttgaacagagtacctctgtaggt
ttagccacacctgtggatgatccaaaatccctgtccaagtaccacgggaagtctggtgca
gaaaagggtattgctgctaggggctctgacacctcttctttaggtgttgcaagttctgga
gtaaagaagttatatcctagtgacaactggagtaaatctggtcaccctagaaatgggtca
cctgaagaagataacgaggacagtgtgaattcagacgatgcagaatcagggagcacgagt
tcatttcctacagatgatgaaagtagcaatataacgggtcttgatactcccagtattaaa
gtttgggatggtagaaataacagaaaccagtctgttactcgcattcatcatcctcttgaa
atttccaagggccataaggcaagaaagacaagcaagggacgtgttcagtctcaaagattg
gtaagatcacagtctgggaggaaaaagcccaggtcaagcagtcaagtatctgatgtctgg
caagagattgaaagaactagtgtatcaatggagggtcaggatatactgaaaccgtttaca
ggacaagtgaactctgacagttcaggtggtgactccgagacagagtcgctgggtagaact
aacagtggagcaacaacgtcttcatcactctcctatatctctattcctgaaagccacagt
ttggcttcaaacaccccagtcagctcattgttagcagactcttttttgacattaagatgc
gaggtagtgtgtgctaatatcgtgaagagcggttctagcacatttgctgtatattccata
tccgtcacagatgtagaaaataaaagttggtctatcaaaagaaggtttcgtcattttgag
gaactccatcggcgtcttaaggagtatccagagtacacattccatttgccgccaaagcat
tttctttcgacaggtcttgatgttcctgtcatacgagaacgttgtaaattgcttgatgca
tatttgaagaaactcttgcaacttccaacaatatcagggtcaattgaagtttgggacttt
cttagtgttgattctcagacgtatagcttctcagattctatatctatcattgaaactttg
tcagatgatacatcatatgataagaagaaagagattggtacttctgcgaaggccactagg
catacaatggatcagaagagaggacttcctaattctggaatgaaggaggcggtgcctcaa
atgaggataaatcacgtgactgatttgtcaaggatgaacacaataaatgtacctcccatt
cctccagaaaggcaagcaaaagctgttggaaaaccattggaggattccggtaagagaatc
gatagattggtgcaagataaaatacatttagacagcaagttggggactactgtcaaggaa
gctgaaatttaccaatcacatccagcaactgagccgcatgttgatggtggtgctgatcca
gcactccctagtgattggattcctccaaatttgagtgttcctattttagatttggttgat
gttcttttccagcttcacgatggtggatggataaggcgcaaggctttttgggtggccaaa
caagtattgcaactgggaatgggtgatgcctttgatgattggctaattgagaaaattcag
atcctccgaaggggatcagtggttgcttcaggtattaggcgggttgagcagattctctgg
cctgatggaatatttttaacaaagcatccaaagcggcaaagaccaactccctctgcaagc
tcatatagttcccctagtggccatcctccctcacctctctcatcacctaaagaagatgat
atcaggagactggatgagctgcaggaaaatgaagctcggcggcgtgagcaatttgtttat
gagctaatgattgataaagcaccaactgcccttgtaggtcttgttggtcgcaaagagtat
gatcattgtgcaaaggacctctactacttccttcagtcatctgtttgtttgaagcaacta
gcttttggcctcctagagctgctacttttgtctgctttccctgaactagaaaatcacttc
aggcaattgattgaagagaaagataagtttggagaactccaacagtcctag
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