Daucus carota (carrot): 108209436
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Entry
108209436 CDS
T05350
Name
(RefSeq) threonine--tRNA ligase, mitochondrial 1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108209436
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dcr01007
]
108209436
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108209436
Enzymes [BR:
dcr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
108209436
Amino acid related enzymes [BR:
dcr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
108209436
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108209436
Prokaryotic type
108209436
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
108209436
NCBI-ProteinID:
XP_017235828
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All DBs
Position
2:46975142..46986613
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AA seq
722 aa
AA seq
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MLSSLHCCRRLLYLRRISSPPYKPQSRLQFSSFPEMGKPGAKSDAKASPSFSKDDAYLTS
VIPRRIALFESIKAEQIKHRESIAGEAIKVTLPDGTVKEGKKWMSTPFDIAKEISKSLAS
NSLISQVNGVLWDMSRPLEGDCELKLFSFDTDEGRDTFWHSSAHILGQSLEMTYGCKLCI
GPCTTRGEGFYYDAHYGEMSLNEEHFEQIASGAKKAAAEKQPFERIEVSRKQALDMFSEN
KFKVEIINDLPEDKTITVYRCGPLVDLCRGPHIPNTAYVKAFACLKASSAYWRGNKDRES
LQRVYGISYPDQKRLKEYISLLEEAKKYDHRELTKKQELFFFHPLSPGSCFFLPHGARIC
NKLLEFMRSQYWKRGYEEVWSPNMYNMQLWETSGHAANYKDNMFVFDIEKQPYGLKPMNC
PGHCLIFDHRVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIK
DEVRGVLEFIKYTYDVFGFSFELKLSTRPEKYLGDLETWEKAEASLTEALNEFGKDWQID
EGDGAFYGPKIDISVSDAMKRKFQCATLQLDFQLPSRFNLSYSAEDESKRERPVMIHRAI
LGSVERMFAILLEHYKGKWPLWLSPRQAIVVSVSEKSQSYALEVKDKIHDAGYYIDVDVS
DRTMNKKVREAQLAQYNYILVVGEGESKNGKVSVRVRDDDKFKEYGLEDLLAHFKKEVDL
FH
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgctatcttcccttcactgctgcagacgactgttatatctccgccgcatttcatccccg
ccgtacaagcctcaatctcgcctccagttcagttcatttccggagatgggcaaacccggg
gccaaatcagacgccaaggcctctccttccttctccaaagatgacgcgtatctcacctcg
gtgattcctcgacgaatcgcacttttcgaatcaattaaagctgaacaaatcaagcaccgc
gaatctatcgccggcgaagccatcaaggtgactttgccggatgggacagtgaaggagggg
aagaaatggatgtcgactccctttgatattgcaaaggagatatcaaagagtttggcatca
aattcgttgatttcacaagtgaatggagtgttatgggatatgtctaggccacttgaaggt
gactgtgagctgaaactattttcttttgatactgatgaaggtagagatacattttggcac
tcaagtgcgcacatcttagggcagtctcttgagatgacttatggatgcaaactgtgtatt
gggccatgtaccacaagaggagagggtttctattatgatgcacattatggtgagatgagc
ttgaatgaagagcattttgagcagattgcctcaggggcaaagaaagctgctgcggagaag
cagccttttgagcgaattgaagtttcaaggaagcaggcgcttgatatgttttctgagaat
aaatttaaggttgaaatcatcaatgatctacctgaggataaaactattacagtatacaga
tgtggccctttagttgatttatgtcgtggaccacatataccaaatacagcttatgtcaag
gcttttgcttgtttgaaggcctcatcagcctattggcggggtaacaaagatcgggaaagc
ttacaaagagtttatgggatatcttatccagaccaaaaacgtttaaaggaatacatttcc
ctactggaagaagctaagaaatatgatcatagagaattgactaaaaagcaggagctgttt
ttctttcacccactaagtcctggaagctgtttctttctgccacacggtgcccgaatctgc
aataaattgttggagttcatgcggtctcagtattggaaaagaggctatgaagaagtttgg
agtcctaatatgtacaatatgcaactgtgggagacatctggtcatgctgcaaactacaag
gataatatgtttgtgtttgatattgagaaacagccgtatggacttaagccaatgaattgc
ccaggacactgtctcatatttgatcatagagttcgttcatacagggaacttcctcttcgt
ttggctgattttggagttttgcatagaaacgaggccagtggcgcccttactggattgact
cgtgtgaggaggtttcagcaggatgatgctcatattttttgcagggaatcccagataaaa
gatgaagtcaggggcgttcttgaattcattaaatacacctatgatgtatttggctttagt
tttgagctgaagctttcgacgaggccagaaaagtatcttggcgatttggaaacttgggaa
aaagctgaagcttcgcttactgaagcgttgaacgagtttggtaaagattggcagattgat
gaaggggatggggcattttatgggccaaagattgatatcagtgtctctgatgccatgaaa
agaaagtttcagtgtgctaccttacagctagactttcaactcccctctcgcttcaacttg
tcttactcggctgaagatgaaagcaagagggagaggcctgttatgatacacagggctatt
cttgggtctgttgaacgtatgtttgccatactgcttgagcattacaagggaaaatggcct
ttgtggctaagtccacgtcaagcaattgttgtttcagtttcagagaaatcacagtcgtat
gctttagaggtgaaggacaagattcatgacgctggttattatatagatgttgatgtgagt
gataggacaatgaacaaaaaggtacgtgaagctcaattagcacagtacaactacatactg
gtggttggcgagggggagagcaagaacggaaaggtaagcgtaagagtgagagatgatgac
aagtttaaagagtatggcttagaggacctccttgcacacttcaagaaagaggttgattta
tttcactag
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