Daucus carota (carrot): 108209640
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Entry
108209640 CDS
T05350
Name
(RefSeq) pentatricopeptide repeat-containing protein At1g30610, chloroplastic
Organism
dcr
Daucus carota (carrot)
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Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
PPR_3
PPR_1
PPR_long
Coatomer_E
Motif
Other DBs
NCBI-GeneID:
108209640
NCBI-ProteinID:
XP_017236140
UniProt:
A0AAF1ARF9
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Position
2:complement(52643643..52651509)
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AA seq
921 aa
AA seq
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MVVILHTNTHMGIKKVESLASFHTPQFNFSSGFLISKAPSFSFGVKKTKKAEQKNIGVFL
GYGNCGKISVVMKGGSGDGGVIEKELEFKPSFDEYLKAMENVQSVRDKRKQAKSKTRKGG
EDNGLVVLEKSDKKMRVEDGEVGGSGRKDLGSVGSGGGDDIRRSEVVSLERRKIESGIVK
GGARKMGFKDNSSVGNIGGLRRSRGDSDVEGTEVGMLKQENKSGLVKEGARRVGIEEKSN
KRNAIGLVRDEPTFRSSGDDTKVERNLGESRNGRWTNNQNGGVRETQQNDIYKGERYRGS
SSYQTSRRDHTEGGKNYAQSAQQNVRRVRVGKHGYEDSGGTDRAAFRALEEYNYIDDKPP
VSRVDMEERIQKLAKSLNGADIDMPEWMFSKIMRSAKIRFADHSMLRVIQILGKFGNWRR
VLQVIEWIQARERFKSHKLRFIYTAALDALGKARRPVEALNLFYTMQKQMSTYPDIVAYH
CIAVTLGQAGHLKELFDVIDSMQSSPKKKFETGVIGKWDPRLKPDIVVFNAVLNACVQRK
KWEGAFWVLQQLKEEGQQPTTTTYGLIMEVMLACGKYNLVHEFFKKIHKSANALTYKVLV
NTHWKEGNIDLAVRVVKEMEGRGIIGTSGLYYDLARGLCSAGRCQEALMQIDKICKVASK
PLVVTYTGLIQACLDSGNIQDGVYIFKHMHKFCSPNLVTCNIMLKAYLDHEMFEEAIGLF
QKLLESGNHISSKSDYKDRVIPDNYTFNLMLDACTIQQRWDDLEFIYRRMLQHEYHFNAK
RHLRIILDACRAGKMELLETTWKHLGEADRLPPPVLVKQMFCLKLEQKDYSAAFACVTNH
PSSDLPEFSQKSWLLFFKENSHRLQKENLVGLVHEISNVYTRSDSPNIILENLSFACREF
LRKHMKVDDFDQSLEARMTCV
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggttgtaatattacatacgaatacccacatgggtatcaaaaaagttgaatctttagcc
tcttttcatactccccaattcaatttttcatctgggtttttgatttctaaagctcccagt
tttagttttggtgtaaagaagaccaagaaagctgagcaaaagaatattggggttttcttg
ggatatgggaattgtgggaaaattagtgttgtcatgaaaggagggtcaggtgatggtggg
gtgattgagaaagaattggagtttaaaccatcatttgatgagtatttgaaagctatggag
aatgttcagagtgttagagataagagaaagcaagctaagagcaaaacaagaaagggtgga
gaggataatggtttggtggttttggaaaagagtgataaaaagatgagggttgaagatggt
gaagttggtggttcggggcgaaaggatttggggtctgtgggaagtggaggtggtgatgat
atcagaaggtcggaagttgtgtcgctggaacggagaaaaattgagagtgggattgtgaag
ggaggggcaaggaagatgggatttaaggataacagtagtgtaggaaatataggtggtttg
agacggagtagaggtgattctgatgtcgaagggacggaagttggaatgttgaaacaagag
aataagagtggactagtgaaggaaggtgctaggagggttggaattgaagagaagagtaat
aagagaaatgccattggtttggttcgagatgaaccgacatttagaagtagtggagatgat
actaaagttgagaggaatttgggagaatcaagaaatgggagatggacgaataatcagaat
ggcggtgttagagaaactcaacaaaatgatatatataaaggagaaagatacaggggaagt
tctagttatcagacaagtagaagggatcatactgaaggtggaaagaattatgctcaaagt
gcacagcaaaatgtgagacgagtcagggttggcaagcatggttacgaggacagtggtggg
acagatagagcagcctttagggcattagaggagtataattatattgatgacaagccacct
gtttcacgggtagatatggaggagagaattcagaaattagcaaagagtttaaatggtgca
gacattgacatgcctgagtggatgttctcgaagatcatgagaagtgcaaagattagattt
gcagatcactcaatgctgagggttattcagatattaggcaaatttggaaactggagacgg
gtgctacaagtcattgagtggattcaggctcgagaacgcttcaaatctcacaaattaagg
tttatttacacagctgcccttgatgcacttggaaaggctaggcggcctgtggaggcactc
aatttattttacacgatgcagaaacagatgtccacatatcctgacattgtggcctatcac
tgtattgctgtcactcttggacaagcaggacatttaaaggaactttttgatgtgattgat
agcatgcagtcttctccaaaaaagaaatttgaaactggggtcattgggaagtgggacccc
cgattgaaaccagatatagttgttttcaatgctgtccttaatgcatgtgtgcaacgcaaa
aagtgggaaggtgcattttgggtgctgcagcagctgaaggaagagggccaacagcctact
accacaacttatgggctcattatggaggtaatgttagcatgtggtaagtacaacttggtg
catgaatttttcaagaaaattcataaatcagctaatgctttgacatataaagttcttgtg
aatacccattggaaagaaggaaacatagatctggctgtacgggttgtcaaagagatggaa
ggaagagggataattggtaccagtggcctttattatgatcttgctcgaggcctctgcagt
gcagggaggtgccaagaggcattaatgcaaattgacaaaatatgtaaagttgcaagtaaa
cctctagtggtaacatacacaggcttaatacaggcctgtttggattctggaaatattcaa
gatggagtttacatcttcaagcacatgcacaagttttgctccccgaatttggtgacatgt
aatatcatgttgaaagcttacctggatcatgagatgtttgaagaagctatagggttgttc
cagaaattacttgaaagtggcaatcatattagcagtaaatcagattacaaggacagagtt
atacccgataattatacgtttaacttgatgctagatgcttgcacgattcagcagagatgg
gatgatctagaatttatttacagaagaatgctgcaacacgagtatcacttcaacgcaaag
cgtcatcttcggatcatactggatgcctgcagggcggggaagatggagctgctggaaaca
acttggaagcacttgggcgaagctgatcgtctgccaccaccagttcttgttaagcagatg
ttttgcttaaaattggagcagaaagactacagtgctgcttttgcttgtgttacaaatcat
ccctcgagcgatttgccagaattttcccagaaatcatggttgctgtttttcaaggaaaat
tctcatcgtctacaaaaggagaatcttgtaggcttggtacatgaaatcagcaatgtatat
actagaagtgactcccctaacataatacttgagaatctaagctttgcttgtagagaattt
ttgagaaaacatatgaaagtagatgattttgatcaatcattagaagctagaatgacctgt
gtctga
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