Daucus carota (carrot): 108209660
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Entry
108209660 CDS
T05350
Name
(RefSeq) serine/arginine-rich splicing factor RS31
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108209660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108209660
Spliceosome [BR:
dcr03041
]
Common components
Common spliceosomal components
SR proteins
108209660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
SET_assoc
RRM_3
PHM7_cyt
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
108209660
NCBI-ProteinID:
XP_017236182
UniProt:
A0AAF1AQ08
LinkDB
All DBs
Position
2:complement(46077242..46081077)
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AA seq
273 aa
AA seq
DB search
MSRPVFCGNFEYETRQSDLERLFSKYGRVERVDMKSGYAFVYFEDERDARDAIRALDHYP
FGYDRRKLSVEWAKGERGRHRDGSKSVANQRPTKTLFVINFDPIRTRVQDVERHFDVYGK
VLNVRIRRNFAFVQFETQEEATKALQCTHMSKILDRVVSVEYALRDDGERGDRYDSPKRN
YGRHADSPYRRSPSPVGRRGRPSPDYGRRASPDYGRRASPDYGRRVSPDYGHRVSPDYGR
PRSPAYDKYRGPSYDRHRSPEYEKFRSRSPVRR
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggcctgttttctgcggaaatttcgagtacgaaactcgccaatcggacctggag
cgtttgttttccaagtacgggagggtcgagcgcgtcgacatgaaatctggctacgcattt
gtttactttgaagatgagcgtgatgctagagacgccatccgtgctcttgaccattatcca
tttggatatgacaggcgcaagttgtcagtggagtgggctaagggcgaacgtggcaggcac
cgtgatggctctaaatctgtagctaatcagaggccaactaaaacattgtttgtcataaac
tttgatcctatacgcacaagggtccaggatgttgagagacactttgatgtttatgggaaa
gttctcaatgttagaattcgacgcaactttgcatttgtgcagtttgaaacacaagaggaa
gccacaaaagctttacagtgtacccacatgagtaagatactggatagggtggtatctgtt
gaatatgcattgagggatgatggtgaaagaggagacagatatgatagtcctaaaagaaac
tatgggaggcatgcagatagtccttacaggaggtcaccaagtccagtggggcgcagaggt
cgtccgagtcccgattatggccgtcgtgcaagtcctgattatggccgtcgtgcaagtccc
gattatggccgtcgtgtaagtcccgattatggccatcgtgtaagtcctgattatggccgt
cctcgtagtccagcatatgacaagtaccgcggtccatcttatgatagacacaggagccct
gaatatgaaaaatttcgcagccgatctcctgtcaggaggtag
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