Daucus carota (carrot): 108209682
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Entry
108209682 CDS
T05350
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcr01009
]
108209682
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcr03021
]
108209682
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
108209682
Protein phosphatases and associated proteins [BR:
dcr01009
]
HAD phosphatases
Fcp/Scp phosphatases
108209682
Transcription machinery [BR:
dcr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
108209682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
108209682
NCBI-ProteinID:
XP_017236213
UniProt:
A0AAF1ANK1
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Position
2:26695762..26699610
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AA seq
644 aa
AA seq
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MANKALVSVADTIYELQKHLLDGIQTDTQLHAAGSLMSKNDYKHVVTERSIAKSCGYPLC
PNDLSCNHVKSKGKYHISLREHRVYDLEEMRMYCSMKCLVESKAFLGTLQEERSTVLDVS
KIEEIMGVFGVRGNDGVGNKRRLRVEGLTIRENEEVAIGEVVVGDANAIEGYVPKGSRGL
DGKNQKQVIKPSKKKPAEKNDLNFSEFDFMSTIITQDEYSVFKVSSQLLAAGSGSNVNSS
GSKVRFEEMNDQFAALGMSSDHASSSSKTKFEEPNQDGDVVDMIDNLSISSGCQGGPGVN
VIEARKGALSGKTDERNVGMLKPSLKSLSSKNVTRSVTWADEKSAGNRRLFEGSELEDTK
QDSEGLNRTNMEENDSLRLASAEACAVALSQAAEAVASGDSDVPDAVSEAGIIVMPPPTY
DERRDADMDTDMEPAAIKWPQKQGITASDFFDNSEDSWYDDAPEGFNLILSPFASMFMSL
FSWISSSSLAYIYGRDESSHEEYLSVNGREYPRRVMAIDNRSSEIKLAVAGCLSRTFPEL
VNDLRLPVPVSTLEKGMSYLLDTMSFMDPVPPFSTKQWHVIIFLFLDALSVSRVPSIAPY
IKSKRKLLQKVLDGAKISEEEYGLLKDLVLPLGRVPYFSAQSGG
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaaagccctcgtctccgtggctgacacaatctacgagctccagaagcatctc
ttggatggaatccaaaccgacacccaattacacgctgccggctcattaatgtccaagaac
gattacaaacacgtcgtcactgaaagatccattgccaaatcttgtgggtacccactttgc
cccaatgatttatcatgtaatcatgttaaaagtaaagggaagtatcatatttcgctgagg
gagcacagggtttatgatcttgaagagatgcgcatgtactgttcgatgaaatgtctagtc
gagagtaaggcgtttttggggacattgcaggaggagagaagcacggtgcttgatgtgagt
aagattgaagagattatgggggtgtttggggtgagagggaatgatggggtggggaacaaa
aggagattaagggttgaggggttgacgattagggagaatgaggaagtggcaattggggag
gttgtggttggggatgcgaatgcgattgaggggtatgttccgaagggttctagggggttg
gatggaaagaatcagaaacaagtgattaaacctagcaaaaagaagcctgctgagaaaaat
gacttgaattttagtgagtttgatttcatgagtacgattattactcaagatgagtatagt
gtctttaaagtatcatcgcagttactggctgctggttctggttccaatgttaatagttca
gggagcaaagttagattcgaggaaatgaatgatcaatttgcagcattgggaatgtcttct
gatcatgcatcaagtagttcaaaaactaaatttgaagagccaaatcaggacggggatgtt
gttgacatgattgataatcttagtatatcaagtggttgtcaaggtggacctggtgtaaat
gtaatagaagccaggaagggagctcttagtggaaaaacagatgaacgtaatgttggcatg
ctcaagccttctttgaagtctttaagttcaaagaatgttacgcgctctgttacttgggct
gatgagaagagtgctggcaatagaaggctttttgaaggcagtgagttggaagatacaaaa
caggattctgagggccttaatcgaacaaatatggaagagaacgattccttaagattagca
tcagcagaggcttgtgcagtagcactgagccaagcagcggaagctgttgcgtctggagat
tctgatgtccctgatgcagtttctgaagcaggaataattgtaatgccaccaccaacatat
gacgaacgtagggatgcagatatggatacggacatggaaccagctgctataaagtggcca
cagaaacagggcattacagcttctgatttttttgataactccgaagattcatggtatgat
gatgctccagaaggattcaatttaattttatcaccatttgcatcaatgtttatgtcgctc
ttttcgtggatttcatcatcttcattggcttatatatatgggcgggatgaaagttcacat
gaagagtatctctctgttaatggaagggaatacccccgtagagtgatggccatagataat
cgttcctctgaaatcaagctggctgttgctggatgtctttctcggactttcccggaacta
gtcaatgaccttagactcccagtaccagtatcaacgttggaaaagggaatgtcctacttg
ctggacacaatgtcctttatggatccagttcctccttttagtacaaagcagtggcacgtt
attatttttttgtttcttgacgcactctctgtgtctcgggttccttcgattgctccgtat
ataaaaagcaagagaaaactgcttcagaaggtgttggatggtgcaaagataagtgaagaa
gagtatggacttctgaaggatttagtacttccacttggccgagtgccttacttttctgcg
caaagtggaggctaa
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