Daucus carota (carrot): 108209688
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Entry
108209688 CDS
T05350
Name
(RefSeq) heat shock factor protein HSF30
KO
K09419
heat shock transcription factor, other eukaryote
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcr03000
]
108209688
Transcription factors [BR:
dcr03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
108209688
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
TMF_DNA_bd
DUF648
DUF2586
Alpha-2-MRAP_C
WH_Halo
TMF_TATA_bd
DUF3287
Motif
Other DBs
NCBI-GeneID:
108209688
NCBI-ProteinID:
XP_017236223
UniProt:
A0AAF1ARA9
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Position
2:complement(52120912..52122959)
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AA seq
354 aa
AA seq
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MDGQKMKQAAAGSSPQPMEGLHEVGPPPFLTKTYDMVQDPATDTVVSWSAAKNSFIVWDP
YKFSTCLLSKCFKHSNFSSFVRQLNTYGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRN
ATSQGIQQQGGGLCVELGHYGVEEELQKLGHDRSILSAEIVKLRQQQQDSQNVIAAMEDK
IQSLESKQQRMMSFLAQALRSPEFMQQYLDKYVQKMDQNQIDMGRKRRLTMSPSQSLEDL
QTQSLDYSYQQKEELANTGVDVESFFSDALDPGATSGVKEEMVSSRGGELDAVNEIIWEE
LLDNNLATVNAEKEEVAIDLPGVEVEDFAANSPDWDSEDLKPLIDQLEYLRSNP
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggatgggcagaaaatgaaacaagcagcagctggttcatcacctcagccaatggaggga
ttgcatgaagtggggccacctccatttcttacaaagacatatgatatggttcaagacccg
gctactgacacggttgtgtcttggagtgctgctaagaatagcttcatcgtttgggatcct
tacaagttctcgacttgtctgctctccaaatgcttcaaacatagtaatttctctagtttt
gttcgccagctcaatacctatggtttcaggaaagtggatcccgacagatgggagtttgcg
aatgaggggtttctgggaggtcagaagcatctcttgaagactatcaaaaggaggagaaat
gccacctcacagggaatacagcagcaaggaggtggcttgtgtgtcgaattaggccattat
ggagttgaagaagagcttcaaaaactcgggcatgatcgcagtattctatctgcagaaatt
gtgaaactcagacagcaacagcaggactcacagaatgtaatcgcagcaatggaggataaa
attcagagtttggagtctaagcagcaacgtatgatgagttttctcgcacaggcacttagg
agtcctgaatttatgcagcagtatctggacaagtatgtgcaaaagatggatcagaatcaa
attgatatggggaggaaacgcagactaactatgagcccaagccaaagtttggaggacttg
caaacacagagtttagattattcttatcagcaaaaagaagagctagcaaatacgggagtg
gatgtggagtcatttttctcagatgcactcgacccaggggcaactagtggtgtaaaggag
gaaatggtttcatcgcgtggtggagagttggatgctgtaaatgagattatttgggaggag
ttgcttgataataatcttgcaactgtgaatgcagaaaaagaagaggtggctattgatctt
ccaggtgtggaagtggaagattttgctgcaaattcaccagactgggatagtgaggatcta
aagccacttattgatcaactggaatatctcaggtcaaatccatga
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