Daucus carota (carrot): 108209697
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Entry
108209697 CDS
T05350
Name
(RefSeq) SEC12-like protein 1
KO
K14003
prolactin regulatory element-binding protein
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108209697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108209697
Membrane trafficking [BR:
dcr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
108209697
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_Prp19
EIF3I
WDR55
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Ge1_WD40
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
108209697
NCBI-ProteinID:
XP_017236237
UniProt:
A0A166DQI8
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Position
2:40725414..40732151
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AA seq
381 aa
AA seq
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MEGKVGCASWIRRPENAHLVVLGTMKQLTHPASLQIFSFDPLTTSLSSSPKASYEFENGS
EAVNIAVHPSGDDFVASTTSGDCMLFEYYGQKLLPKELHPLQGVGPQKCLAFSTDGSKFA
TGGVDGHLRIFEWPSMRIILNEPKAHNSFNDMDFSLDSEFLATTSTDGSARIWKTDDGVL
ITSLTRNSDEKFELCRFSKDGTKPFLFCTVQKGFKAVTSVWDISNWTKIGHKRLLRKPAS
IMSISLDGKYLAQGSKDGDVCVVDVKKMEICHWSKRLHSGSSIASLDFCPSERVVLTTSS
EWGAMVTKLSVPADWKDWQIYLVLLGLFLASAVAFYIFFEKSDSFWNFPLGKDQTTRPKI
NTILGDPQSEDWGAFGPLDIM
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggagggaaaggttggctgcgcatcgtggatccgacggccagaaaacgcccatctcgtc
gtcttgggaacgatgaagcaactcactcatcccgcctcccttcaaatcttctccttcgat
cctctcactacttcgctctcatcttctcccaaggcgagttatgaatttgaaaacgggagt
gaagctgtaaatatagctgtgcatcctagtggagacgattttgttgcttccactacttct
ggagactgcatgttgtttgagtattatggtcaaaaactgttgccaaaagaattacatccc
cttcaaggtgtaggtccacaaaaatgtcttgcttttagcactgatggatccaaatttgct
actggtggggtggatggacatctacggattttcgagtggccaagtatgcgcatcatttta
aatgaaccaaaggcccacaattcattcaatgatatggacttcagccttgactcagagttc
ttagctacaacatctactgatggttcagcaagaatctggaaaacagatgatggtgtttta
ataacttccttgacccgcaattctgatgaaaagtttgaactatgtcgtttttccaaggat
ggtacaaagccatttttgttttgcaccgttcagaagggcttcaaagctgtgacttctgtc
tgggacataagtaattggaccaaaattggtcacaagagactgctgagaaaacctgcctca
attatgtctatcagtttggatgggaaatatcttgcacaggggagcaaagatggggatgtt
tgtgtagttgatgttaaaaaaatggaaatttgtcattggagtaaaaggcttcactcaggc
tcttcaattgcatcactggatttctgccccagtgaaagagttgtgctgactacttcttca
gaatggggagctatggtgactaaactatctgttcctgcagattggaaagactggcagata
tatttagtgcttctgggactatttttggcgtcagcagttgcattttacattttcttcgag
aagtctgattcattttggaattttccacttgggaaggatcaaactacaaggccgaagatc
aatacaattctgggtgatccacagtccgaagattggggagcctttggaccattagatatc
atgtaa
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