Daucus carota (carrot): 108209710
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Entry
108209710 CDS
T05350
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108209710
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
108209710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
EIF3I
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
TFIIIC_delta
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_IFT122_1st
WD40_Gbeta
WD40_RFWD3
NBCH_WD40
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
108209710
NCBI-ProteinID:
XP_017236256
UniProt:
A0AAF0WGI5
LinkDB
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Position
2:48300854..48308023
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AA seq
824 aa
AA seq
DB search
MSSCEVESVFIGAGCNRIVNNVSWGASNLVSFGAQNAVAIFCPKSAQILTTLPGHKASVN
CTHWLPSTKFAFKAKHFERHFLLSGDAEGAIILWELTLTGRKWRLVSQIPPHKKGVTCIT
AYMISDIVAVFASTSSDGKVNVWEVVLPSLEGGECKFSCLDSLHVGSKSMVTLSLAQFPG
NTGHLVLAMGGLDNKIHLYCGTKTGNFIHSCELKGHTDWIRSLDFSLPVCTNGEANTLLL
VSSSQDKGIRIWKMVLHNSSIKQEGTTLASYIKGPIFVAGSFSYQISLESLLIGHEDWVY
SVEWQPPFSIEGNTCYQSESILSASMDKTMMIWQPERTTGIWTNVVTVGELSHCALGFYG
GHWSPNGDSILAHGYGGSFHLWRNVGVDFDNWQPQKVPSGHFAAVSDISWGGDYMLSVSH
DQTTRIFAPWLKDPILGEGNAWHEIARPQVHGHDINCTTIIRGKGNHRFVCGAEEKVARV
FEAPLSFLKTLNHATLEGTGNFEDTQVDMQILGANMSALGLSQKPIYIQTSHETPNRNGS
EVLDTLETIPDAVPVVLTEPPIEEQLAWHTLWPETHKLYGHGNELFSLCCDHEGKLVASS
CKAQSVAVAEIWLWQVGSWKPVGRLQSHSLTVTQMEFSYDDNFLLAVSRDRHFSIFSFKQ
TGTDVTSHQLLTRQEAHKRIVWACSWNPFGHEFCTGSRDKTVKIWAIENESSVKLLMTLP
PFKSSVTALSWVGLDRQRNSGLLAVGMENGHIELWSISVQRNEDGVASAPNVTRIIQFDP
LICHVSSVNRLAWRNSEKREDCGSIELASCGADHCVRVFSINVL
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtctagctgtgaagtggagagtgtgttcataggagctggttgcaacagaatcgttaat
aatgtttcatggggtgcttctaatttggtttcctttggtgcccagaatgctgttgctatt
ttctgtcccaagagtgcacagattttaacaacactccccggtcacaaggcttctgttaac
tgcactcattggcttccctccaccaaatttgctttcaaagcaaaacattttgagcgacat
tttcttctgtctggggatgctgaaggtgccatcatactctgggagttgactctcacgggc
agaaagtggagacttgtttcacaaataccaccacacaagaaaggagtcacttgtattaca
gcatatatgatttctgatattgttgcggtatttgcttccacctcctcagatggtaaagtt
aacgtgtgggaggtggtccttccatctttagaaggaggtgaatgtaagttctcatgcttg
gattcccttcatgttggttccaaatctatggttaccctttctctagcacaatttccaggg
aacacagggcacctagttctagcaatggggggcttagataacaaaattcatctctactgt
ggtacgaaaacaggaaattttattcattcctgtgagctgaaaggccatactgattggatc
aggagtttggatttttctttacctgtatgcacaaatggtgaagctaatactcttctacta
gttagttcatcacaagataaaggcatacgcatctggaagatggttttacataattcttca
atcaagcaagaaggaacaactttggcttcttacataaagggcccaatttttgtagctggc
tcattctcttatcagatatcattggaatctcttctcattgggcatgaagattgggtgtat
tcagtcgagtggcaacctcctttttccatcgagggaaacacgtgttatcaaagtgaaagc
atattatctgcctccatggacaagacaatgatgatctggcaacctgagaggactacaggt
atctggacgaatgtggtaactgttggggagctgagtcattgtgctctaggcttttatggt
ggacattggagtccaaatggagattcaattttagcacatggctatggtggatctttccat
ttgtggagaaatgttggtgttgactttgataattggcaaccacaaaaagttccttctggg
cacttcgcagctgtgtctgacatttcatggggtggtgattatatgttgtctgtcagtcat
gatcagacaacaagaatctttgctccatggctcaaggatccaattttgggggaaggaaat
gcttggcatgaaattgctcgccctcaagttcatggtcatgatataaattgtacaacaatt
attcgtgggaaaggtaaccacaggtttgtgtgtggagctgaggagaaagttgccagagtt
tttgaggctcctttatcattcttgaaaacattaaaccatgctaccttggaaggaactggt
aattttgaagatacgcaagtagatatgcagattttgggtgcaaatatgtctgctcttggg
ttatcacagaaacctatatatattcaaacttcccatgagaccccaaacagaaatggtagc
gaagttcttgatactctggaaactattccggatgcagttccagttgtgttgactgaacca
cccattgaagaacaacttgcatggcatactctatggcccgagacccacaaactctatggt
catggaaatgagcttttttctttgtgttgtgaccatgaaggcaaacttgttgcttcgtca
tgtaaggctcagtcagtagcagtagcagaaatatggctatggcaagtgggttcttggaaa
ccagtcggtcgtcttcagtctcacagcttaacagtaacacagatggagttctcttatgat
gacaattttcttttggctgtctcgagagatcggcatttctccatattctcctttaagcaa
acaggcacagatgtgaccagccaccagcttttaaccaggcaagaggcacacaagagaata
gtatgggcatgttcttggaatccatttggccacgaattttgcacaggatcaagggacaag
actgtgaaaatatgggccatagagaatgaatcttcagtcaagcttctaatgacactacca
ccgtttaaaagtagtgtaacggccctatcttgggtcggtcttgatcggcagcgcaattct
ggattacttgctgtcggaatggaaaatggtcacattgaattatggagtatttctgttcaa
agaaatgaagatggtgttgcttcagcgccaaacgttacacgcatcatacagtttgatcca
ttaatatgccatgtttcgtctgtcaatcgtttggcatggagaaactcagagaagagagaa
gattgtggaagcatagagcttgcttcttgcggcgctgatcattgtgtaagagtttttagc
ataaatgtactatga
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