Daucus carota (carrot): 108209896
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Entry
108209896 CDS
T05350
Name
(RefSeq) probable galacturonosyltransferase 3
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00520
Amino sugar and nucleotide sugar metabolism
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
108209896
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dcr01003
]
108209896
Enzymes [BR:
dcr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
108209896
Glycosyltransferases [BR:
dcr01003
]
Polysaccharide
Structural polysaccharide
108209896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
DUF3862
Motif
Other DBs
NCBI-GeneID:
108209896
NCBI-ProteinID:
XP_017236587
LinkDB
All DBs
Position
2:39790387..39797243
Genome browser
AA seq
677 aa
AA seq
DB search
MSTSRIAYLIFQVLIYIALIGAVFPDTLAGQKGFIGSWPTFDCPQCIGQKIIRLEQEQTN
AAAAISKHLPDKDIDIIVTYSDISGDVRIKSVKSKDLSASWVWKNPIDDHTQNSKPFAKP
LQFDTRFEDSDDHYTNESLTGDEIQHPVGPPVHPLKIKRQKLRLERRKRRTLELIEQGKE
IENEMNAAAAERAKTLDTTVMGRYSIWRIEYENPNSDSTLKLMRDQIIMAKAYAKIAKAK
NYDDLYDSLLEHSRKSQYAIGDAYSDAELQPCALDRAKEMGHILSLAKDQLYDCIEVART
LRAMLQMKETNVLEMKKKSAFLTQLAAKTVPRPLHCLPLLLATDYLLQGYENKEFPNSEN
LEDNSLFHYAIFSDNVLATSIVINSTVLNAKEPEKHVFHVVTDKLNFVSMRMWFLVNPPG
GATIEVKNVDAFTWLNSSYCPVLRQLESARMRDYYFHAHQASSTTSGADNLKYRNPKYLS
MLNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSVDLKGMVNGAIETCKESFHRLDK
YLNFSNPNIYENFDPNACGWAFGMNMFDLKEWRLRNITGIYHRWQDMNEDRTLWKLGTLP
PGLITFYNLTYPLDRTWHVLGLGYDPALNQTAIQDAGVVHYNGNYKPWLDLAIDKYRSYW
SKYVMFDNPYLKLCNIG
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatctcggatcgcctatttgatctttcaggtcttaatttacattgctctgatc
ggagcggtgtttccggatactttagcaggtcaaaaaggcttcataggatcttggcccaca
tttgattgcccacaatgtattggccaaaagattattaggttggaacaagagcagacaaat
gcagctgctgcaattagcaaacatttgcctgacaaggatattgacataatagtgacatac
agtgacatctccggtgatgttcgaatcaagagtgtgaagtcaaaggacttgtcggcttct
tgggtttggaagaatcctattgatgatcatacacagaattccaagccatttgcaaaacca
ttacaatttgacacgagatttgaagacagtgatgatcattatactaatgaaagtttaact
ggagacgaaatacaacatcctgtcggtcctccagttcatcctctgaaaataaagcgtcag
aagttacgcctagaaaggaggaagcggcgaactttagagctaatcgaacaaggcaaagag
atagaaaacgagatgaatgcagctgcagctgaaagagctaaaacgctggacactactgtt
atgggtagatacagtatatggagaatagaatacgaaaatccaaattctgattctaccctg
aaacttatgcgagatcagatcataatggccaaagcttatgcaaaaattgctaaagctaaa
aattatgatgatctctatgattctctgcttgaacattccaggaagagtcaatatgccatt
ggagatgcatattctgatgctgaactacagccatgtgcacttgaccgggcaaaagaaatg
ggtcacatcctgtctctagcaaaagaccaactatatgactgtattgaagtagcaaggacg
ctaagggccatgcttcagatgaaagaaacaaatgtacttgaaatgaagaaaaaaagtgca
ttcttgactcagttagctgcaaaaacagttccaagaccactgcattgcctgccactactt
ttagcaacagactatttactgcagggttatgaaaacaaggaatttccaaacagtgaaaat
cttgaggataattctcttttccattacgccatattttcggataatgttcttgcaacatct
atagtcataaattctacagtgttaaatgcaaaggagcctgaaaagcacgttttccatgta
gtgacagataagttgaattttgtatcaatgagaatgtggtttcttgtcaaccctcctggt
ggtgcaactatcgaggttaagaatgtagatgcttttacgtggctcaattcttcatattgt
cctgttctgcgtcagcttgaatcagctcggatgagagattattattttcatgcacatcaa
gcatcttccaccacctccggagccgacaatctcaagtataggaacccaaaatacttatct
atgctgaatcatcttaggttctacctccctgaagtttatcctaaactagagaaaatctta
tttctggatgatgatattgttgttcagaaggatctaacacctttatggtcagttgattta
aaagggatggtgaatggtgcaatagagacctgtaaggagagctttcacagattggataag
tacctgaatttctctaatccaaatatatatgagaattttgatccaaatgcttgtggttgg
gcatttggaatgaacatgtttgatctgaaagagtggaggctccgcaatattactggcatt
tatcatcgctggcaagacatgaatgaagatagaactctttggaaacttggaacactgcct
cctggactgataactttttataatctgacttatccattggaccggacctggcatgtgttg
ggacttggctatgatccggccctcaaccaaacagcaattcaggatgcaggtgtggtccac
tataacggaaactacaaaccttggttggatcttgccatagacaaatacaggtcttattgg
tctaaatacgttatgtttgataacccatatcttaaactttgcaacattggctag
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