Daucus carota (carrot): 108209957
Help
Entry
108209957 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108209957
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108209957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108209957
Spliceosome [BR:
dcr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
108209957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Pox_G5
Motif
Other DBs
NCBI-GeneID:
108209957
NCBI-ProteinID:
XP_017236665
UniProt:
A0A162AYS9
LinkDB
All DBs
Position
2:complement(58762647..58769842)
Genome browser
AA seq
558 aa
AA seq
DB search
MKSKREEEKIEDADEAKRQKLLHQSTVSSPPQSAFENALLPLATYDDDEEEDEQTYLDNI
VDDPVQSKENGIEHQEGEEEEDEDDEVGVAQGQRSRMIELRRDCPYLDTVNRQVLDFDFE
RFCSVSLSNLNVYACLVCGKYFQGRGQKSHAYTHSLEAGHHVYINMQTERVYCLPDGYEI
NDPSLEDIRHVLNPRFSQEQVDQLDKNRQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQ
SLMRVTPLRNFFLIPENYAHSKSPLVQRFGELTRKIWHARNFKGQVSPHEFLQAVMKASK
KRFKIGSQSDPVEFMSWLLNTLHEKLKSSKKKHSIIHECFQGELEVVKEVHGKAIGERNE
NDALNNGTGSDGAAGGKNVVTETSRMPFLMLGLDLPPPPLFQDVMEKNIIPQVPLFNILK
KFDGESVTEVVRPRIARMRYRVTKLPQYLILHMRRFTRNNFFVEKNPTLVNFPVKNLELK
DYIPLPAPKGKEKVRSKYDLIANIVHDGKPGEGSYRVFVQRKSEELWYEMQDLHVSETLP
QMVALSETYMQIYEQQQH
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgaagagagaagaagagaagattgaggacgccgatgaagcaaagagacagaaa
ttgctacatcaatctacggtttcatcacctcctcaatctgccttcgaaaatgcactcctt
cctcttgctacttacgatgatgatgaggaggaggatgaacaaacatacttggataatatt
gtagatgatcctgtacagagtaaggaaaatggtattgaacatcaggaaggcgaggaagag
gaggatgaagatgatgaggtaggtgtagcccaagggcaacgtagtcgaatgatagagcta
cgcagagactgcccatatcttgacactgtcaaccgccaggttttggattttgatttcgaa
aggttctgttcagtttctctctcgaatttgaatgtatatgcatgtctagtttgtgggaag
tatttccaaggaagagggcagaaatctcacgcatacactcatagccttgaagccgggcac
catgtttatatcaatatgcagacagagagagtttattgtctccctgatggatatgaaata
aatgacccatcattggaggatattcgacatgttctaaatccaagatttagtcaggaacaa
gttgatcagcttgataaaaacaggcaatggtctagggcacttgatggttctgattacctt
cccggaatggttggactaaacaacatcaaagagacagattttgtgaatgtcacaattcag
tcgttaatgcgtgtcactccgttgaggaacttcttcctaatccctgaaaattatgcacac
agcaaatctcctcttgtgcagcgctttggggagcttacacggaaaatttggcatgctagg
aacttcaaaggacaggtgagtccacatgagtttctacaggcggttatgaaagcaagtaaa
aaacgcttcaaaataggttctcagtctgacccagtagagtttatgtcatggcttcttaac
acgcttcatgaaaaactcaagtcttcaaagaaaaagcatagcatcatccatgagtgtttt
cagggagaactggaggttgtgaaagaagtccatgggaaggctattggcgagaggaatgag
aacgatgccctgaataatggcactggcagtgatggtgcagctggaggtaaaaatgttgtc
accgagactagcaggatgccatttttgatgttgggattggatttgccaccaccaccactt
tttcaggatgtgatggagaaaaatataattcctcaggttccactttttaatattctgaag
aagttcgacggtgagtctgtcacagaagttgtacgaccacgtatagcaaggatgagatac
cgtgtgaccaagttaccacagtatctgatactccatatgcgtcgatttacaaggaataat
ttctttgtggagaagaatccaactctggttaattttcctgttaaaaacttggagctgaag
gattacatcccacttccagccccaaaaggaaaggagaaggttaggtctaagtatgactta
attgccaatattgtacatgacgggaaaccaggtgaaggatcctatagagtgtttgtacag
cggaagtcagaagaattatggtacgagatgcaagatctacatgtttctgagactcttcct
cagatggttgcactttcggagacgtatatgcagatttatgagcagcaacagcactga
DBGET
integrated database retrieval system
