KEGG   Daucus carota (carrot): 108209964
Entry
108209964         CDS       T05350                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
dcr  Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dcr03400]
    108209964
DNA repair and recombination proteins [BR:dcr03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    108209964
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-RING_UBOX zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_2 DEAD Prok-RING_4 zf-C3HC4_4 RING_XB3-XBAT31 ResIII zf-RING_5 zf-RING_4 zf-ANAPC11 UBA_Rad5
Other DBs
NCBI-GeneID: 108209964
NCBI-ProteinID: XP_017236672
UniProt: A0AAF1AP46
LinkDB
Position
2:complement(38242835..38255994)
AA seq 1021 aa
MGNKVTDELLPMIRSIVGQDYSDMDIIRALHMSNNDCTAAINIILDTPKLRKPEITARKS
KAFDQTCGGHLKEEGNCVVKESALVSNGGSKGVEVMSKCSSSMSSDEWWFVGCSDVSGLS
TCKGRTLKCGEEVNFTFAPERKGSLVTPRKFGGGRGRGGNASSEIVRFSSKACGEIGRIP
NEWARCLLPLVRDKKIRIEGSCKSAPAVMSLMDTVILSVSVYINSSMFHQSHQTSLKATG
SATDDSVIHPLPTLLRLLGLTPFKKAEFTPGDLCTKSDPLHSKEKSDIPATLLHLNKFKN
PSPDGETVENEESISDADLDNIVGVGDSSELEEMDPPSTLQCELRPYQKQALYWMLQLEK
GQYLDDAATTLHPCWDAYWLADKRDLIVYVNSFSGDATVELPSTLQMARGGILADAMGLG
KTIMTISLLLAHSEKGGRLGNESTSRSLTDNIEADRSPPVKRAKKFPGFDKLGNKQSALI
GGGNLIVCPMTLLGQWKGEIESHSQPGSVSIYLHYGQTRSKDAKLLARNDVVLTTYGVLA
SEFTAENAEDNGGLYSVRWFRVVLDEAHTIKNSKSQISTAAAALIADRRWCLTGTPIQNN
LEDIYSLLRFLRVEPWGSWAWWNKLVQKPFEGGDERGLKLVQSILRPIMLRRTKFSTDRE
GRPILILPPADMKVIYCELTEAEKDFYEALFKRSKVKFDQFVEQGRVLHNYASILELLLR
LRQCCDHPFLVMSRGDTQEYSDLNKLAKRFLKGGSSLMEGEAKDMPSRAYVQEVVEEIRK
GEEGECPICLEVFEDAVLTPCAHRLCRECLLASWQSHTSGLCPVCRKTVSKHDLITAPTT
SRFQIDIEKNWVESSKVSILLSELENLRSSGSKSIIFSQWTAFLDLLQIPLSRSKFAFLR
LDGTLNQHQREKVLKQFSEDSNILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQA
VMRIHRIGQTNSVNIRRFIVKGTVEERMEAVQARKQRMISGALTDQEVRSARLEELKMLF
T
NT seq 3066 nt   +upstreamnt  +downstreamnt
atgggcaacaaagttaccgacgaattattacccatgattaggtcaattgttggccaggat
tactccgacatggacatcattcgagctcttcatatgtcaaacaatgattgtactgctgca
attaacatcattttagacacacccaagttgagaaaacctgaaattacggctcgtaaatcc
aaggcatttgatcaaacatgtggtgggcatttgaaggaagaggggaattgtgtggtgaaa
gagagtgcactggtgtcgaatggtgggagtaaaggtgtggaggtgatgagtaagtgttcg
agttcgatgagtagtgatgagtggtggtttgtggggtgtagtgatgtttcgggcttgtct
acgtgtaaagggaggaccttgaaatgcggggaggaagtgaatttcacctttgctccagag
aggaaggggagtttggttacgccaagaaagtttggcgggggaagagggcgtgggggtaat
gcttcgtcggaaattgtgaggttttctagtaaagcttgtggggagattggtcgcattccg
aatgagtgggctagatgtcttttgccactggtcagagataagaagatacggatagagggt
tcttgcaaatctgcacctgccgtgatgagcttaatggatactgttatcctgtctgtaagt
gtatacataaatagttccatgtttcaccaaagccaccaaacttcactcaaggcaacaggg
agtgcgactgacgactcagttatccaccctttaccaactttgctcagattactaggatta
actccctttaagaaggcggaatttactccaggtgatttgtgtactaagagcgatcctctg
cactcaaaggaaaagtctgacattcctgccacactcttgcatctcaataagtttaagaac
ccatctcctgatggagagacagttgaaaatgaggagtctatttcagatgcagatctggat
aatattgtcggggtcggtgacagctctgaattggaggaaatggatcctcctagtaccctt
caatgcgaacttcggccgtatcagaagcaggctctttattggatgcttcagctagagaag
ggacaatatctggacgatgcagcaacaacacttcatccatgttgggatgcatattggctt
gcagacaagagggatttgattgtctacgtgaattccttttccggcgatgctacagtagaa
ttgccgagcacccttcagatggctagaggaggaattttggcagatgctatggggcttggt
aagaccatcatgacaatatcccttcttcttgctcactcagaaaaaggtggacgactgggt
aatgagtccacaagtcgttccttaactgataatatcgaagccgatcgatctccaccagtt
aagagagcaaagaagtttcctggatttgataagcttgggaacaaacagtcggctctcata
ggtggaggaaatctcattgtatgtcctatgactcttctgggacaatggaagggagaaatt
gaaagtcactcacaacctgggtctgtgtctatatatcttcattatggacagactagatca
aaggatgcaaagcttttggcacggaatgatgttgtacttactacttatggagtattagca
tcagagtttacagcagagaatgctgaagataatgggggactttactcggtgagatggttt
agagttgtgcttgatgaagctcatactattaaaaattctaagagccaaatttctactgct
gcagctgcccttattgctgatcgtcgttggtgtcttaccggtactccaatacagaacaac
ttagaggatatctacagtcttcttcgctttttgagagtcgaaccttggggaagctgggcc
tggtggaataagcttgttcagaaaccttttgaaggaggtgatgaaagagggttaaaattg
gtccaatctatcttacgcccaattatgttgagaagaacaaaatttagcactgaccgagaa
ggcaggccaattttaatccttccgccggcagatatgaaggttatctattgtgaattaaca
gaagctgaaaaggacttctacgaagctttgttcaaacggtcaaaggtgaagtttgatcaa
tttgttgagcaagggcgggttcttcataactatgcttcaattttggagctactcttgcgt
ctacgtcaatgctgcgaccatccatttcttgtaatgagccgaggtgatactcaagaatat
tctgacctgaataagcttgcgaaacgcttccttaagggtggttcaagcctgatggaaggg
gaagcaaaagacatgccttcacgggcttatgttcaggaagttgtagaagagatacgcaag
ggggaagagggagaatgtcctatatgccttgaagtttttgaggatgcagtgttgacaccc
tgtgctcatcgtttatgccgagaatgtttgttggcgagttggcaatctcatacatctggt
ctttgtcctgtttgtagaaagactgtcagcaagcatgatcttataacggcaccaactacg
agccggttccagattgatattgagaaaaattgggtggagtcttcgaaagtttctattctg
ttaagtgaactagaaaatctccgctcatcaggctctaaaagcattattttcagtcagtgg
acagcctttctagatcttttgcagattcctctttctcggagcaaatttgcatttcttcgt
ttggatgggacgcttaaccagcatcagcgagagaaagtcttgaagcagttttcagaagat
agcaatattctggtgcttcttatgtcattgaaggctggcggagttggaataaacctgaca
gcagcatctaatgcatttgtcatggatccatggtggaatccagccgtggaagaacaagct
gtgatgcgaattcatcggattggacaaacaaatagtgttaatatcagacgattcatagtt
aagggaacagttgaggaaagaatggaagcagtgcaagcgcgtaagcagcgaatgatatcc
ggagccttaactgatcaggaagttcgatctgcacgcttagaagagctcaaaatgcttttc
acttag

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