Daucus carota (carrot): 108209981
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Entry
108209981 CDS
T05350
Name
(RefSeq) long chain acyl-CoA synthetase 5 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00061
Fatty acid biosynthesis
dcr00071
Fatty acid degradation
dcr01100
Metabolic pathways
dcr01212
Fatty acid metabolism
dcr04146
Peroxisome
Module
dcr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108209981
00071 Fatty acid degradation
108209981
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108209981
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dcr01004
]
108209981
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcr04147
]
108209981
Enzymes [BR:
dcr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
108209981
Lipid biosynthesis proteins [BR:
dcr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
108209981
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of breast milk
108209981
Exosomal proteins of breast cancer cells
108209981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Peptidase_M17_N
Motif
Other DBs
NCBI-GeneID:
108209981
NCBI-ProteinID:
XP_017236696
UniProt:
A0A161ZGW1
LinkDB
All DBs
Position
2:complement(59034432..59039341)
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AA seq
660 aa
AA seq
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MAQKRFVVEVEEAKEAGGGRPLMGPVYRNVLAKDGFRPPAIGIESCWDMFRVSAEKYPEN
QMLGQREIVKGEAGKYAWLTYKQVYDMVLQVGASIRVRGAHQGARCGIYGPNCTKWVISM
QACNAYGLYCVPLYDTLGSGAVEYIICHAEISIVFADETKLPELLKTLPSVSKHLKTLVS
FGKITSEQKAIAHSFALPLFSWDEFLLLGIGKEFELPAKKKSDVCTIMYTSGTTGDPKGV
MITNESIIWLISGVNHHLGSINAEFTEKDVYLSYLPLAHIFDRVMEEQIIFSGASIGFWQ
GNIKLLMNDVKELKPSIFCAVPRVLDKIYSGLVEKISSGGLIKKSLFNIAYSYKLENMRR
GYKHGAAAPIFDKIVFSKVKEGLGGNMRLILSGAAPLSTAVETFLRVVTCADVLQGYGLT
ETCGGSFVQQLHQVAMIGTVGPPLPSIDVCLESVPDMGYDALAAATPRGEICIRGRTLFS
GYYKRQDLTQEVMNHDGWFHTGDIGEWQPDGSMKIIDRKKNIFKLSQGEYVSVENLENIY
SLVSGIDAICIHGNSYESFLVAVANPNKEVLESWAHQNGVAGDFSTICDNPLAKAYLLGE
LTKIAKQNKLKGFEMIKAVHLDPVPFDMERGLLTPTFKKKRGQFLKYYQNVIDEMYTRAR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaagaggtttgtggttgaggtggaggaggcaaaagaagcaggcggcggaagg
ccgttgatgggaccggtttaccgcaacgtgttggcgaaagatggattccggccaccagcg
atcgggattgagagctgttgggatatgttccgagtttctgctgaaaagtacccggaaaac
caaatgcttgggcagagagagattgtcaagggagaggcaggaaagtacgcgtggttaact
tacaagcaagtgtacgacatggttttacaggttggagcctccatccgcgtgcgtggggct
caccagggtgcacgatgtggtatttacggacctaactgcaccaaatgggttattagcatg
caggcatgcaatgcttatggcctttactgtgtccctctctatgacactctcggctcgggt
gctgtggaatatattatatgtcatgcagagatttccattgtttttgccgacgaaaccaaa
cttcctgagcttctgaaaacacttcccagcgtgtcaaaacacttgaaaactctagtaagc
tttggcaagataacgtccgagcaaaaggcgatcgctcatagctttgctctgccacttttt
tcttgggatgaatttttgcttctgggaataggtaaggagtttgagctaccagcaaagaag
aaaagtgatgtatgtacgattatgtatacaagtggaacaaccggggaccccaaaggagtg
atgatcaccaatgaaagcattatctggcttatatctggagttaatcaccatctagggagc
ataaatgcagagtttacagaaaaggatgtgtatttgtcatatcttcctttagcacatata
tttgatcgggtgatggaggaacagatcatattttctggtgcctccataggattttggcaa
gggaacatcaaactacttatgaatgatgtgaaagaactaaaaccgtccatcttttgtgct
gtaccacgggtgttggacaagatatattcaggtctggtagagaagatttcttcagggggt
ctcatcaaaaaatcattgttcaatattgcttattcttacaaacttgaaaacatgaggaga
gggtataaacatggagcggcagctccaatatttgacaagattgtgtttagtaaggtcaag
gaaggtttaggaggaaatatgcggctgattctttcgggagcagctccactatccactgct
gtagagacctttttaagagtagtcacttgtgctgatgttctccaaggatatggcttgacg
gaaacctgcgggggttcatttgtccaacagctgcaccaagttgccatgattggcaccgtg
ggtcccccactgccatccattgatgtgtgcctagaatctgttcctgatatgggctatgat
gctctggcagcggctactccacgtggagaaatatgcatacggggaaggactttgttctcc
ggttactacaaacgtcaggacctcacacaggaggtgatgaatcatgatggctggttccac
acaggggatatcggtgagtggcaacctgatggaagcatgaaaattattgaccgcaagaaa
aacatatttaagctttctcaaggagaatatgtttccgttgagaatctggagaacatttat
tcccttgtttctggcattgatgcaatctgcatccatggcaacagctacgagtcttttctt
gttgctgttgctaaccccaacaaagaggtgctcgagtcatgggctcaccagaatggagtt
gctggagactttagcaccatctgcgacaatcccctagcaaaagcatatcttcttggagag
cttacgaagattgccaaacaaaacaagttgaaaggcttcgagatgattaaagctgtgcat
ctcgatcctgtaccatttgacatggaacgcggtctcttgacaccaactttcaagaaaaag
aggggccaatttctcaaatactaccagaatgtcattgacgaaatgtacacaagagcaaga
tga
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