Daucus carota (carrot): 108210120
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Entry
108210120 CDS
T05350
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
108210120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108210120
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
108210120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
108210120
NCBI-ProteinID:
XP_017236877
UniProt:
A0A166D053
LinkDB
All DBs
Position
2:28429070..28432307
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AA seq
644 aa
AA seq
DB search
MEEERKTTAVAELIEKATNSIEPNLDPRLLKSIKFVVRSSELDLRIAAQTLMNLMKRDHS
QVRYLTLLIIDELFMRSKLFRTLLVEKLDHLLSLSVGFRRNLPLPAPPAVASLLRSKAIE
FLEKWNTTFGIHYRQLRLGYDYLKNTLRFQFPNLQANAARMQQQRSERERKTKEILLNKF
QLLKGSFSTIKDEIQSTIDEIGECLDIIKSKDENMSLAPIDDEEMEEFRNSELRQIRFDS
LKEGEKVHENSENKVVFDALRESYKLLVTKHLVSVQEWISVLIRVETSENRFRDLMLKEF
IDIRNRVQLVKKKCEESGCILPNTKNHEEDDFWEEGQVETHGNGRINPPSKISEDTSIAS
TSHEKIEYAGYDDRGLNGNKPNHDGNKTDLDPLKSKLLAEAPVMNWGSFLDNWGSNRDFM
AHQRGLELESHWGRVDYDAVIPAAKIAELNVQTTLYNEEPVALQECRAPLRKGGLCRRRD
QRVCPFHGPIVCRDDEGKPIYQTSSVETTALDLGEDVLEQLAQQAVSNVRKNDQEEAKKK
EHDKKSLKRARLAKVREHNDAVLRDAALASTSGSQHFGEDMGTMGGSSSTRNKKQTLASM
LKKKVTVKDRLSQRLLNTRVRDSTTKQLTLGEDAKYREAFPNQW
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagagaaaaacaacggcggtggcggagctgattgagaaggccaccaattca
atcgagcccaatcttgatccacgtctccttaagtccatcaaatttgtggtccgctcttct
gaattggacctccgaattgctgctcaaaccctaatgaacctcatgaaacgagaccattct
caggtaaggtatcttacacttctcattattgatgaattatttatgaggtcaaagcttttt
agaacccttcttgttgagaagttggatcatttgttaagtttaagtgttggattcagaaga
aatttgccacttcctgctccaccagctgttgcatctcttctgcgttcgaaggccattgaa
tttctcgagaagtggaacaccactttcggaattcattataggcagcttagattaggttac
gattacctgaaaaacacccttaggtttcaatttcctaatctgcaagctaatgctgctcga
atgcagcagcagagaagcgaaagggagaggaagacaaaagaaatcctgttgaataaattt
caacttctgaaaggaagtttttcaacaatcaaggatgaaatacagtctacaattgatgaa
ataggagaatgcttggatataattaaatctaaagatgagaatatgtcattggctcctata
gatgatgaagagatggaagaatttcgcaattctgaactacggcagatccgctttgattca
ttgaaagaaggagagaaggttcatgaaaatagtgagaataaagtggtttttgatgctttg
agggaatcatacaagctattagtgaccaagcatttagtttctgttcaagagtggatatct
gttctcataagggttgaaacatcagagaacaggttcagggacttgatgttaaaggagttc
attgacattcgcaaccgtgtccaattagtaaagaagaaatgtgaggaatcagggtgtatt
cttccaaacactaaaaatcacgaggaagatgacttttgggaagagggacaggttgaaaca
catggtaatgggagaattaatccacccagtaagataagtgaggatacttctattgcatct
acatctcatgaaaaaattgagtacgctggatatgatgatagaggattaaatggcaacaag
ccaaatcatgatggtaacaaaaccgacttagatcctctgaagagtaagcttttagctgaa
gctccagtaatgaactggggttcgtttttggataattggggctcaaatcgggattttatg
gctcaccaaaggggactggaacttgaaagtcattggggcagggtggactatgatgcagtt
attccggcagcaaagatagcagagttgaatgttcaaacaactctttacaatgaagagcct
gttgcactccaggaatgtcgtgcaccattaaggaaaggcggactttgtcgaagaagagac
cagagagtttgcccattccatggtcccattgtttgtcgggacgatgaaggcaaaccaata
tatcaaacatcttcagtggagacaactgctctggatttaggggaagacgtgttagaacaa
ctggcacaacaagctgttagtaatgttaggaaaaacgaccaagaggaagcaaagaagaaa
gaacatgataaaaagtctttaaagcgagctaggcttgcaaaagttcgggaacacaatgat
gctgttttacgagatgctgcccttgcttcgacttcaggatctcaacactttggtgaggac
atggggacaatgggtggaagttcatctaccagaaacaaaaaacagacccttgcatcaatg
cttaaaaagaaagtgactgtgaaagatagattatctcagaggcttttgaacacacgggtt
agggactctacaacaaaacagttgacgctgggggaagatgccaaatacagagaagccttt
ccgaatcaatggtaa
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