Daucus carota (carrot): 108210224
Help
Entry
108210224 CDS
T05350
Name
(RefSeq) pleiotropic drug resistance protein 1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
dcr
Daucus carota (carrot)
Pathway
dcr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108210224
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcr02000
]
108210224
Transporters [BR:
dcr02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
108210224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA
AAA_25
AAA_28
RsgA_GTPase
nSTAND3
Zeta_toxin
PDR_CDR
DO-GTPase2
DUF4070
Motif
Other DBs
NCBI-GeneID:
108210224
NCBI-ProteinID:
XP_017237011
UniProt:
A0AAF1AQK5
LinkDB
All DBs
Position
2:50626023..50633491
Genome browser
AA seq
1428 aa
AA seq
DB search
MDIGADLFRATNSLRQNSGNTNLDAVPRANSNSFWRDGNAQVFAQSVREEDDEESLKWAA
LEKLPTYDRIRKGLLSGSKGATELDVGDVGNQERKILFDRLLKTAEEDNEKLLRKLRDRI
DSVGVTLPTIEVRYEHVHIEAEAHVGSRALPSVVNFYISLLEDLFNVLHVLPNKKKRITI
LNDISGVIKPCRMTLLLGPPSSGKTTLMLALAGKLDKALDFSGNVTYNGHTMKEFVPQRT
AAYISQHDLHMGEMTVRETLTFSAKCQGVGSRYETLAETLRREKEANIKPDPDVDILIKA
AATPGQQADVVTDYVLKVLGLDICADTMVGNEMLRGVSGGQKKRVTTGEMLVGPSRVLFM
DEISTGLDSSTTYQIVNSLRHSVHILQGTALISLLQPAPETYNLFDDIILLSDGYVVYQG
PRESVLEFFEHMGFKCPQRKGVADFLQEVTSKKDQKQYYMHSDKPYAFVTAKEFAEAFKS
FHVGEKLGAEIATPFDRSKGHPAALTVKKYGTERNELVKALTQREMLLIKRNSFVYIFKL
GQIAVMAIVAMTVFFRTEMDKDTSQDGSLYFGAIFFGVATFMFNGMAEFPLVIGKLPVFY
KQRDYLFYPPWAYALPMWFTRIPFSIIEAAIWAGLTYYPIGLDKNAGRFLRYYLALVLTN
QMGFGFFRLIAAICRDMIIANVFGGFALFILIALGGFVLSRDKIADWWIWGYYISPLMYA
MNAIGVNEFLGHSWNKPNPSGPGYLGASVLKSRGFFPYWYWYWIGVAVLVGLIFIFNGFF
TMALQFLNPLKSAPAVVADDDVSEKKEESKDETGQESKGMVLPFEPHSITFDNIRYSVDM
PQEMKDQGASEEKLLLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGEI
KISGYPKKQETFARISGYCEQTDIHSPHVTVHEALVYSAWLRLPPEVDDEKRKMFVNEVI
NLVELDTLVDALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM
RTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGLELYAGAVGKESCELIKYFESI
EGVSKIPEGYNPATWMLEVSTAAQEVALGIDFTEVYQKSDLCRRTKDLIKELGTPRDGTQ
ELQFATKYSQSFMTQVRACLWKQRCSYWRNTAYTAVKLAFTTVIALMIGTMFWDLGSEIG
TVQDLFNAMGAMYAACLFLGVQNGSSVQPVVAVERTVFYRERAAGMYSALPYAIAQVLVE
IPYIFAQAVIFSGVVYSMIQFKWTLVKFAWFFYFSVVTFMYFSFYGMMTVAMTPNSAVAA
ICASAFYGMWNLFCGFLIPRPSIPVWWRWYYWACPVSYTLYGLLASQFGDYDDKILEDVK
VPIKVFLKDYFGFEHSKIWCAAVAVAAFAILFAIVFGIAIKLINFQRR
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggatattggggctgatttgtttagggcaaccaatagcttgagacaaaacagtggaaat
actaatctcgatgcggtgcctcgggctaatagtaactcattctggagggatgggaatgca
caagttttcgcgcagtctgtaagagaagaagatgatgaggagtctcttaagtgggctgct
ctggaaaaattgcctacttatgatcgtataaggaaaggcttgctttcaggatcgaagggg
gctactgaactcgatgtcggtgatgttgggaatcaggagagaaagattttgtttgatagg
cttctcaagactgctgaggaagataatgagaagctcttgaggaagctccgggaccgaatt
gatagtgttggagttactttaccaacaatagaagttagatatgaacatgtgcatattgaa
gcagaagcacatgtcggaagcagagctctgccttctgtggtgaatttctatataagtctg
ttggaggatttgttcaatgtgctccatgtacttccaaataaaaagaaacgtataactatt
ctcaatgatatcagcggagtcatcaaaccttgcagaatgacattgcttttaggtcctcca
agttctgggaaaacgacattgatgcttgctttggctgggaagcttgataaggccctcgat
ttttctgggaatgtgacttacaatggacataccatgaaagagtttgtgcctcagaggaca
gcggcttatatcagtcagcatgatcttcatatgggcgaaatgacagttagagagaccttg
actttctctgcaaaatgtcagggggttggctcacgctatgaaacgttagcggagacttta
agaagagagaaagaggcaaatatcaaacctgatcccgatgttgatatacttataaaggct
gcagcaacaccaggtcaacaggctgatgtggttactgattatgtcctaaaggtattggga
cttgatatatgtgccgatacaatggtaggtaatgagatgcttaggggtgtctctggagga
caaaagaagcgcgttacaacaggtgagatgttggttggaccgtcaagggtactatttatg
gatgagatatctactggtttggacagttcgacgacttaccaaattgtgaattcactacga
cacagtgttcatattctccagggaactgctctcatctccctcctgcagccggctccagaa
acttataatttatttgatgacattattctcttatctgatggttacgtagtgtatcagggt
cccagagaaagtgtgcttgagttttttgaacatatgggtttcaaatgcccccagaggaaa
ggcgttgctgactttttacaagaagtgacatcaaaaaaagatcagaagcagtactatatg
catagtgataagccatacgcatttgttacagccaaagaatttgctgaggctttcaagtca
ttccatgtaggagaaaaactaggagctgaaattgctacaccctttgacagaagcaaaggg
cacccagctgctctgactgttaaaaagtatgggactgaaaggaatgaactcgttaaagct
ttgactcaaagagaaatgttgcttattaagaggaactcatttgtttatattttcaagttg
ggccaaattgccgttatggcaattgtagccatgacggttttctttagaactgagatggac
aaagatactagccaagatggatcgctctactttggtgctatattttttggtgtggctact
ttcatgttcaatggaatggcagagtttcccctggtaataggaaagcttcctgtattttac
aagcagagggactatcttttttaccctccatgggcatatgctcttccaatgtggttcacc
aggatccccttttcaataattgaagctgcaatatgggcaggcctcacttattatcctatt
ggattggataaaaatgctggaagattcttaagatattacctagcccttgtcctcaccaac
caaatgggttttgggtttttccgtctcatcgcagcaatctgtagagacatgatcattgca
aacgtatttgggggattcgccttgtttatacttatcgcattaggtggcttcgtcctgtca
cgagacaagatagctgattggtggatatggggttactatatctcaccgctgatgtatgcg
atgaatgctattggagtgaatgaatttctggggcattcctggaacaaaccaaatccaagt
ggacctgggtacttaggagcttctgttctgaagagtcgagggttctttccatattggtac
tggtactggataggggtggcagtattggttggattaatatttatctttaacggcttcttc
acaatggcacttcagtttctcaaccctctgaaatcagctccagcagtagtcgcagatgat
gatgtctctgaaaaaaaggaagaatccaaagatgagactggtcaggaaagtaaaggaatg
gttctcccatttgagccacattccatcacgtttgataatattaggtattccgttgacatg
ccacaggaaatgaaagaccaaggtgccagtgaggagaaactgttgcttctgaagggtgtc
agtggagcttttaggccaggtgttctaaccgctctaatgggtgttagtggtgctggtaaa
actactttgatggatgtgctggctggtcggaaaactggtggatatattgagggtgaaatt
aaaatatcagggtatccaaagaagcaagaaacctttgctcggatatccgggtactgtgag
cagactgacatccactcacctcatgttactgttcacgaggccttggtttactcagcctgg
ttgcggctgcctccagaagttgatgacgagaaaagaaagatgtttgtaaatgaggtcatt
aatcttgttgaattggacacattggtggatgcgctagttggtttgccaggtgtaagtggt
ctctcaaccgagcagcggaagaggttgacaattgcagttgagctggtggctaacccctcg
ataatattcatggatgaaccaacttcagggctggatgctagagctgctgcaattgtgatg
agaacagttaggaatactgttgacacaggaaggacagttgtttgcacaattcatcagcca
agcattgatatatttgaagcttttgatgagcttttcttaatgaagcgaggtggactagag
ttatatgcaggggcagttggtaaggagtcttgcgagctgatcaagtactttgagagtatt
gaaggagtaagtaaaatccccgaaggctataatcccgctacctggatgttggaagtctct
acagctgctcaagaagtagctttggggattgatttcaccgaagtgtaccagaagtcagat
ctgtgcaggagaaccaaagatcttataaaagagttgggcacacctcgtgatggtacacag
gaacttcagtttgctactaaatactcacaatctttcatgacccaagtccgagcttgcctg
tggaaacaaagatgctcgtactggcgaaacacagcttacactgcagtcaaactggccttc
acaacagttatagcattgatgatcgggacaatgttctgggaccttggttcagagataggc
actgtacaagatttgtttaacgcaatgggtgctatgtatgctgcatgcctcttcctaggg
gtccaaaatggttcatcagtgcagccggtggtagctgtagaacgcaccgtgttttacagg
gaaagagcggctgggatgtattctgctttaccatatgccattgcacaggttttggtagaa
ataccatacatatttgctcaagctgtaatcttcagtggtgttgtatattctatgatccaa
tttaaatggaccctggtgaaattcgcatggttcttttacttctcggtcgtcacattcatg
tacttcagcttttatggcatgatgactgtggccatgacacctaattccgcggtggctgcc
atctgtgcttctgcattttacggaatgtggaaccttttttgcggatttttgattccaaga
ccgagcattccagtgtggtggagatggtattactgggcatgtccagtgtcatacacactg
tacgggctgcttgcgtcgcaatttggagactatgatgacaagattcttgaagatgtgaaa
gtacccatcaaggtatttctcaaagattattttgggttcgaacacagtaagatatggtgt
gctgcagttgctgtggctgcttttgccattcttttcgcaatagtgtttggtatagctata
aaacttatcaacttccagaggagataa
DBGET
integrated database retrieval system
