Daucus carota (carrot): 108210381
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Entry
108210381 CDS
T05350
Name
(RefSeq) autophagy-related protein 18d
KO
K22991
WD repeat-containing protein 45
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108210381
Membrane trafficking [BR:
dcr04131
]
Autophagy
Other autophagy associated proteins
Others
108210381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_2nd
BCAS3_WD40
WD40
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
108210381
NCBI-ProteinID:
XP_017237119
UniProt:
A0AAF0WNE4
LinkDB
All DBs
Position
3:complement(7732697..7741041)
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AA seq
411 aa
AA seq
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MSSTVSPFGGFPPSLGIDNHNSPIAGDIGPFSNSEPDVSNNDEAELLYASWNQDYGCFAA
GTSRGFRIYNCDPFKETFRRDMKNGGFRIVEMLFRCNILALVGGKENTQYPPNKVIIWDD
HQSRCIGEFTFRSEVRAVKLRRDRVVVVLEHKVYVYNFMDLKLLHQIETLANPKGLCCLS
HHLNTSVLACPGIRRGQVRIEHFGLHITKLIHAHDAQIACMTLTMDGLLLATASTKGTLI
RIFNTMDGTRLQEVRRGVDRADIYSIALSPNVQWLAVSSDKGTVHIFSLRVRGAGEDTSF
QSSAMKSPAFVHQNSSSSLEALISPSTGANPGSSLSFMKGVLPKYFSSEWSFAQFHISEC
THFSAAFGSQNTLVIVSMDGSFYRCSFDPVNGGEMIQQEYVRFLKNENKPR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaactgtctcaccttttggtggatttcctccatcactagggatcgacaatcac
aattcaccaatagctggagatatcggtccttttagcaactccgaaccagatgttagcaac
aatgatgaagcagaattactttatgcctcatggaatcaggattatggctgctttgctgct
ggaacaagtcgtggatttcgtatatacaattgtgatccctttaaagaaactttcaggcgg
gatatgaaaaatgggggattccgtattgtcgagatgctgttccgttgcaacattctggca
cttgttggtgggaaagaaaatacgcaatatcctccgaataaagttataatatgggatgat
caccagagccggtgcattggggaattcacatttagatctgaggtccgagcagttaaatta
agaagggatcgtgtggttgtggtacttgaacacaaggtttatgtttataattttatggat
ctgaaacttcttcatcaaattgagactttggcaaaccccaaaggactctgttgtctctca
caccatttgaatacatccgtcttggcttgcccaggcattaggcgaggacaggtccgcatc
gaacattttgggctacatattaccaagttaattcatgcacatgatgctcagatagcatgt
atgaccttgacaatggatgggcttcttctcgcaaccgctagcacaaaaggcacattgata
aggatctttaacacaatggatgggactaggttgcaagaggtacgtagaggagtggaccga
gcagatatatacagtattgctctctccccgaatgtgcagtggctggctgtttcaagtgac
aaaggtactgttcatatattcagtcttagggtacgaggcgctggggaggacacatctttt
cagtctagtgctatgaaaagtccagcatttgttcaccagaattcatcatcttcacttgaa
gcccttatatctccgagtacgggggcaaatcctggttcatcattgtcattcatgaaaggg
gtcttgccgaaatattttagctcagagtggtcatttgctcagttccacatatcagagtgt
acacactttagtgctgcattcggatctcagaacacacttgtcatcgtcagcatggatgga
agcttctacaggtgtagttttgaccctgtgaatggaggggagatgatccagcaggaatat
gtccgtttcttgaagaatgaaaacaagccaagatga
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