Daucus carota (carrot): 108210392
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Entry
108210392 CDS
T05350
Name
(RefSeq) serine--tRNA ligase isoform X1
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108210392
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dcr01007
]
108210392
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108210392
Enzymes [BR:
dcr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
108210392
Amino acid related enzymes [BR:
dcr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
108210392
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108210392
Prokaryotic type
108210392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
GAS
YabA
Syntaxin
Flu_PB2_6th
BRE1
Motif
Other DBs
NCBI-GeneID:
108210392
NCBI-ProteinID:
XP_017237141
UniProt:
A0A166BP56
LinkDB
All DBs
Position
3:50510367..50516668
Genome browser
AA seq
444 aa
AA seq
DB search
MLDINLFREDKGGAPERIRESLRRRFKDPAVVDEVIALDQECRLRQYELDNLRKDFNKIN
KEVAKLKIAGEDASQMIKSTEENKDSTAKKVEEVEVARKALYSKLETIGNLVHDTVPISN
NEDDNAIIRSWGEKRSDQKLKSHVDLVELLGIAELKRGANVAGGRGYYLKGDGVRLNQAL
ICFALDFLEKRAYTPLQPPFFMRKDIMAKCAQLAQFDEELYKVSGEGDDKYLIATAEQPL
CAYHIDDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCVTSPKGND
SWDMFDEMIKNSEEFYQTLKIPYHIVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCS
NCTDYQSRKLEIRFGQKKSNDQTKQYVHMLNSTLTATERTICCILENYQRDDGVEVPEVL
RPYMGGKSFMPFLAKEAKGKKSKS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgttggacattaatctcttcagggaagataaaggaggcgcccccgaaagaatcagggaa
tcgctgcgtaggaggtttaaggatcccgcggtggttgatgaggtcattgcactcgaccag
gagtgccgattgcgtcaatatgagctggataatttgcgcaaggattttaataagatcaat
aaggaagtcgctaaactcaaaattgctggtgaggatgcaagtcaaatgattaaaagcacc
gaggaaaacaaggattcgactgcaaagaaagtggaagaagttgaagttgcccgcaaagcc
ctgtattcaaaactggagacaattggcaaccttgtgcatgatacagtcccaattagcaac
aacgaggatgataatgctataatccgatcgtggggtgagaagcgctcagatcaaaagcta
aaaagtcatgttgaccttgtcgagcttctaggaattgcggaactgaaaagaggggcaaat
gtagccggaggtagaggttattatctaaaaggagacggtgtacgccttaaccaagctctg
atttgtttcgctcttgattttttggagaagagggcttacacccccttgcagcctcctttc
ttcatgagaaaagatattatggccaagtgtgctcaattagcacaattcgatgaagagctt
tacaaggttagtggtgaaggagatgataagtatctaattgctacagctgagcagccactt
tgtgcttatcatatagatgattggattcatccttctcagcttccaataagatatgctgga
tattcctcttgcttccgtaaagaagctggttcacatggtcgagatactcttggtattttc
cgagttcatcagtttgagaaagtggaacagttctgtgttactagtccaaagggaaatgat
tcctgggacatgttcgacgaaatgatcaaaaactctgaagagttctaccagacgctaaaa
attccctaccacatagtggcaattgtcagtggtgctttaaacgacgcagcagcaaaaaaa
tatgatttggaagcatggtttccagcatcccagacttatagggagcttgtctcatgttca
aattgtaccgactaccagtccagaaaattggaaatccgatttgggcaaaagaagagcaat
gatcagacaaaacagtacgttcatatgttgaattcaacccttacagcaacagaaaggaca
atatgttgcattctcgagaactaccaacgagatgatggagtggaagtaccagaggttctg
cgaccatacatgggtggcaaatccttcatgcctttcttggccaaggaagcaaaagggaag
aaatcaaagtcttga
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