Daucus carota (carrot): 108210459
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Entry
108210459 CDS
T05350
Name
(RefSeq) vesicle transport v-SNARE 13 isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108210459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108210459
Membrane trafficking [BR:
dcr04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
108210459
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Cauli_AT
Motif
Other DBs
NCBI-GeneID:
108210459
NCBI-ProteinID:
XP_017237234
UniProt:
A0AAF0WRS3
LinkDB
All DBs
Position
3:46990570..46995133
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AA seq
220 aa
AA seq
DB search
MAGVFENYERQYCELSANLTKKCRAATLVDGEQKKQRLSEAKVGLDEAETLIRKMDTEAR
SLQPNVRAVLLAKLREYKSDLNNLKSEVKRIASTNLNQAARDELLESGMADAKMVSANQR
ERLLMSTEKLNKSSDRVRESRRTMLETEDLGVSILSDLHQQRQALLHADNTLHGVDDNVG
RSKKIMTAMSRRMSRNKYIIGFIVAVLVLSIILILYFKLK
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgtatttgagaattatgagcgtcaatactgcgagctttcggctaatctgacc
aaaaaatgtagagctgctactcttgttgatggagagcaaaagaagcaaagactatctgaa
gcaaaagttggactggatgaagctgaaactttgatacgcaagatggacactgaagcaaga
agtttacagcctaatgtgagggctgtgcttcttgccaaattgagagaatataaatctgat
ctgaacaatctgaaaagtgaagttaaacgaattgcatcaaccaacttgaatcaggctgct
cgagatgagttattggagtcgggcatggctgatgcaaaaatggtatcagctaatcaaaga
gagagattacttatgtcgactgaaaagttaaacaaatctagcgacagggtaagggaaagt
agaaggactatgttggagacagaggatttaggtgtttcgattctttcagatctgcaccaa
cagcggcaggctcttttgcatgctgataacactctacatggggtggatgataacgtaggc
aggagtaaaaaaataatgacagccatgtcaaggcggatgagcaggaacaaatacatcatt
ggcttcatagtagcagtccttgttctctcaatcatactaatcttgtacttcaaattgaag
tag
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