Daucus carota (carrot): 108210684
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Entry
108210684 CDS
T05350
Name
(RefSeq) polycomb group protein FIE1 isoform X1
KO
K11462
polycomb protein EED
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108210684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dcr03036
]
108210684
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
108210684
PRC2.2
108210684
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_DCAF4
WD_LRWD1
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
108210684
NCBI-ProteinID:
XP_017237558
UniProt:
A0A165ZE69
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All DBs
Position
3:219210..232348
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AA seq
371 aa
AA seq
DB search
MSSKVAVGCEAVVGSLTPSKKKDYRVTNRLQEGKRPLYAVVFNFLDSRYFNLFATVGGNR
VTVYQCLEGGVIAVLQSYVDDDKDESFYTVTWACTLDGAPLLVAGGINGIIRVIDVGNEK
IHKSFVGHGDSINEIRTQILKPSLVLSASKDESVRLWNVHTGICILIFAGAGGHRNEVLS
VDFHPSDIYRIASCGMDNTVKIWSMKDFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASIH
TNYVDCNRWLGDFIMSKSVDNEIVLWEPIMKDQSPGEGSVDILQKYPVPECDIWFIKFSC
DFHYNAAAIGNREGKIFVWELQSSPPALIARLSHGQSKSPIRQTAMSFDGSTILSCCEDG
TIWRWDVVATS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaaggtggcggtaggatgcgaggcggtggtaggaagcctgacgccttcaaag
aagaaggattatagagttaccaacaggctccaggagggcaagagacctctatacgccgtc
gttttcaacttccttgattctcgctacttcaatctcttcgctaccgtcggcggcaatcgg
gtgactgtttaccagtgccttgaagggggtgttattgctgtactgcagtcgtatgttgac
gatgataaggatgagtctttttacacagtgacctgggcatgtacccttgatggggcacca
ctattggtggcaggaggaataaatggtataattcgagtcatcgatgttggaaatgagaag
atacacaagtcctttgttggtcacggtgactcaataaatgaaatcagaacccagatcttg
aagccatcactcgtgttgtctgctagcaaagatgaatctgttcggctgtggaatgtccat
actggaatatgcattctaatatttgctggagctggaggacatcgaaatgaagtcttgagt
gtggactttcatccttcagatatatatcgcattgcaagttgtggtatggacaacactgtc
aaaatctggtcaatgaaagacttctggacttatgtggagaaatcttttacatggactgac
cttccatcaaagttccctactaaatatgtgcagtttccggtgtttatagcctcaatacat
acaaactatgttgattgcaataggtggcttggtgattttatcatgtccaagagtgtggac
aatgaaattgtattatgggagccaattatgaaagatcagtcgcctggggagggttctgtt
gacatcctccaaaaatatcctgttccagaatgtgacatatggtttattaagttttcatgt
gatttccattacaatgctgctgctataggaaatagagaggggaagatctttgtttgggaa
ttgcagtctagcccccctgctcttattgcaaggttgtctcatggacagtcaaaatctcct
attaggcagactgcaatgtcctttgatggaagcacaatcctcagctgctgtgaagacgga
acaatttggcgttgggatgtagtggcaacttcatag
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