Daucus carota (carrot): 108210783
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Entry
108210783 CDS
T05350
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108210783
03036 Chromosome and associated proteins [BR:
dcr03036
]
108210783
Enzymes [BR:
dcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
108210783
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108210783
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
108210783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MOV-10_beta-barrel
AAA_11
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
108210783
NCBI-ProteinID:
XP_017237690
UniProt:
A0A166H8M9
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All DBs
Position
1:complement(36690267..36693258)
Genome browser
AA seq
663 aa
AA seq
DB search
MSTTIKKDYSLLYHGAADSKDANTACIVSGVIQNQKPPRSSLKKHLSSLKSASNSTPKQA
ESKCTWVPKASSSRRGVSQKNINLISTDAALEDLEKPLSEPFIESNLSSSSPSYSTATPH
PPEYPLISVNPASSFGLSKSTNRQTKAKCIQLRKDASTHGLASEDRKYVIKMNTILENSE
NPDSSPTFSPKSPPIFKRTQKNKTKHILVKKRALPLYIVPKHIKKLIKRDIVPIVLRKPL
SPLTYKDYFATLLYAEDYYFEKWDGFEMLDVSMRNVSLELHKAVMHRRKGKSKSLSRSEL
SDDEDVRTLVQFEIDSIPGKRPFLLSKDFAYIRQSGTEDTPFKGIIYRVEKSKNLFVEFG
VEFYDQHYSGCKYDVKFSLNRVCLKRTHNAIEAASDVLFKNFLFPDCIPSSKNISLEELW
PFHLTLKEDQLRAVHRIVMHQGPSPYLLEGPLSVTRAKKHTRDRVIIAEKLTSTGTVIQE
AVLQLWKASSVNRILICTNSNSACDALMSSLQKEIPVSDIFRSNAAFRELDEVPDDILPH
CPYEEKDELFSCPQLAELEKFRLILSTFLSTSRLHNEGLKPGHFSHIFLVDASSAIEPET
LVPLANLANEETVIVVSGKPQNCSRWVRSSIARYNGLQRSYFERLRNSELYVTLNPEVIS
ELA
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgagtactactatcaagaaagattattctcttctttatcatggcgcagctgattccaaa
gatgcaaacacagcatgcattgtttccggagtaattcagaatcagaaaccacctcggtct
tcacttaaaaaacatctgagttcactgaaatctgcatctaactcgacacccaaacaggcc
gaatcaaagtgcacgtgggttcccaaggcctcttcctctcgtcgtggagtttcacaaaaa
aacataaatttgatcagcacagacgctgcactggaggatcttgaaaaacctttgtctgaa
ccattcattgagtcaaatttatcatcgtcttcgccttcatatagtactgcaactccacat
cctccagaatatccactcatatctgttaaccctgcttcatcttttggtttatctaagtca
acaaaccgacagactaaagccaagtgcatccagctcaggaaggatgcttccacacatggt
ttagcttcagaggatcgcaaatatgtgatcaagatgaacactatacttgaaaattctgag
aatcctgactcatcacctactttttctccaaaatctcctccaatcttcaaaagaactcag
aagaacaaaaccaagcacatcttagttaagaagcgcgcactccctctgtacatagttccc
aagcatataaaaaaattgatcaagagagacattgtaccaatagttctcaggaagcctttg
tcacccttgacatacaaggattacttcgctacgctgctctatgctgaagactactatttc
gagaaatgggatggattcgaaatgctagatgtatctatgaggaatgtgagtttggagttg
cacaaggcagtgatgcaccgaagaaaaggaaaatcaaaaagcttaagtagaagtgaatta
agcgatgatgaagatgtcagaactttagtacaatttgaaattgattccattcctgggaag
aggcccttccttttatctaaagacttcgcctacattcgacaatctggcacagaagacacc
ccattcaagggtatcatctatcgcgttgagaagagcaagaacttgtttgttgagttcggg
gtagaattctatgatcagcactactcaggatgcaaatatgatgtcaaattctcattaaac
agagtctgtttaaaacggactcacaacgcaattgaagctgcatcagatgtgttgttcaag
aatttcctttttcctgactgcattccaagtagcaaaaatatctctctggaggagctttgg
ccatttcatctcacacttaaagaggaccaactgcgcgctgtacataggattgtaatgcat
caaggcccgtctccttatctcctggaaggtccgctttctgtaaccagggcaaaaaaacat
acaagagacagagtcattattgcagaaaaattgacaagtactggaaccgtgattcaagaa
gcagtacttcaattatggaaggcctcttcagtaaaccggatactaatatgcacaaattca
aatagcgcttgtgacgcgctcatgagtagcttgcagaaggaaatccctgtatcagacatt
tttcggtccaatgctgcattcagagagctggatgaggtacctgatgacatcctacctcat
tgcccttacgaggagaaagacgagcttttttcttgtcctcagcttgcagagctcgaaaaa
ttcagactaatcttgtcaactttcctgagcacatcacggctacataatgagggtcttaag
ccagggcacttcagtcacatttttcttgtggatgcctcgtctgccatcgaacccgagact
ctggtgccactggccaatctagcaaatgaggagactgtgattgttgtcagtggtaaacca
caaaactgttcgagatgggttcggtccagcattgcaagatataatggcttgcaaagatca
tactttgagagacttcggaatagtgaattgtacgtgaccctcaatccagaagttatatca
gagctggcctga
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