Daucus carota (carrot): 108210798
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Entry
108210798 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108210798 isoform X2
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108210798
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108210798
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108210798
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4
zf-rbx1
RIMB1_N
zf-C3HC4_4
WDR55
Beta-prop_WDR5
zf-RING_Vps41
Beta-prop_THOC3
RNase_Y_N
DUF4200
zf-RING_11
zf-Nse
ANAPC4_WD40
WD40_CDC20-Fz
Anthrax_toxA
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
108210798
NCBI-ProteinID:
XP_017237702
LinkDB
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Position
3:complement(6208813..6216631)
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AA seq
598 aa
AA seq
DB search
MSDVNPAFYIYDDVEDEDVVVVEDVMDLDEEEDDDDEYEDDEDDDDDDEEDDEAVSTAAI
VKNKTTPLSIDDDGSGIEELMSKDNNEIDGLCCPICMEPWTSEGVHQVCCLPCGHIYGLS
CIQKWIRQRQSSRKCPQCKRSCSLKDVRLLYASRIVVVDEELQKKVQKLEAKCASLDTKH
AECVKREDEGKKREAELYLQVQQLKERARYLEGMLEHSERTAGSVTASSDFPRSSCTGQF
RKTGCSNSFELQKEFNIEGARVFDVDASGQVLLIARRLTGMGGLFGLTKISLVAPHDRLD
MQLPSNTKAVRDLRFSPRDRLLLVASLGKKLSIISSQSNTTVLTYDLPAAAWSCSWDISC
SNYAYAGLQNGMLLVFDMRQTREPVKCLAGITCNPIHSLYSVSPESPSPSGVRTILTASS
IGACEWNFGGVDERPFLIPGSDNEGVCVSLACSSSNSNIVASYRPKVNMLNKESASQAVP
TPSTNAMGNSVVGSHVSYKRTSSQCFQKLGSTCANVNDIRLPKSAIVDIRNNDAPLFVSG
DEARGEITLQLLPSLLTVQHLTPQKFPVRDVKFTHGSNSSILGCLCDDILKLYSLKLS
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgtgaatcctgctttctatatatacgatgatgtagaagacgaagatgttgtt
gttgtagaagatgttatggacctagacgaagaggaagacgatgacgatgaatatgaagat
gacgaagatgatgatgatgatgatgaagaagacgatgaggcagtttcgactgcggctatt
gtgaagaacaaaacgacaccgttgagtattgatgatgatggtagcggcattgaggagtta
atgagcaaagataataatgaaattgatggattgtgttgcccaatttgtatggagccttgg
acttctgaaggtgttcatcaagtctgttgtcttccttgtggacatatttatggtttgtct
tgcatacagaaatggattcgacaacgtcaaagttcaaggaagtgtcctcaatgcaagaga
agttgcagtctgaaggatgttagattactttatgcatcccggattgttgttgttgatgaa
gaactacaaaagaaagttcaaaaacttgaagctaaatgtgcatctcttgacacaaagcat
gcggaatgtgtaaagagagaagatgaagggaaaaagagagaagctgaattatatctgcag
gtgcaacaactcaaagagagagcaaggtatttggagggcatgttagaacattccgagagg
acagcaggatcagtcactgctagcagtgattttccaaggagttcttgtacaggacaattt
aggaagacaggatgttccaacagctttgaattgcagaaagagttcaatattgaaggtgct
cgcgtatttgatgtggatgcttctggtcaagttttgcttattgctcgaaggctcactgga
atggggggactgtttggacttactaaaataagtttggtagctccgcatgatagattggat
atgcaacttccttcaaacacaaaggctgttagagacttgcgattctctccccgtgacaga
ttgttactggttgcctcactagggaaaaagctgtcaattattagttctcaaagcaacacc
acagttcttacctatgatttgccggctgctgcttggtcatgttcatgggatatcagctgt
tcgaattatgcatatgctggattacagaatggcatgcttttggtgtttgatatgcgccaa
actcgggaacctgtaaaatgcttagccgggataacatgcaacccgattcatagtttatat
tcggtttcacctgagtcaccctcgccttctggtgtgagaacaattctaactgcatcttca
attggcgcttgcgagtggaactttggaggtgttgatgaaaggccatttttgatcccggga
tcagataatgagggagtttgtgtatctcttgcatgttcttctagcaatagtaacattgta
gcatcatatcgtccaaaagtaaacatgcttaacaaggaatctgcatcccaagctgttcct
acaccttccactaatgctatgggaaactctgttgtgggctctcatgtttcatacaaaaga
acaagtagtcaatgttttcagaaactcggatctacatgtgccaatgtaaatgatatcagg
ctgccaaaatctgcaatagttgacatacgcaacaatgacgcaccattatttgtgtctggg
gatgaggctagaggtgaaataacgctgcaattgctgccatcattacttactgttcagcat
cttacccctcaaaagtttcctgtccgtgatgtgaagtttacacatggcagcaattctagt
atactcggctgtttatgtgacgatatattgaaactatactctctcaagctctcatga
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