Daucus carota (carrot): 108210879
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Entry
108210879 CDS
T05350
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04120
Ubiquitin mediated proteolysis
dcr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108210879
04120 Ubiquitin mediated proteolysis
108210879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
dcr03110
]
108210879
04131 Membrane trafficking [BR:
dcr04131
]
108210879
04121 Ubiquitin system [BR:
dcr04121
]
108210879
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108210879
Chaperones and folding catalysts [BR:
dcr03110
]
Other chaperones and cochaperones
Others
108210879
Membrane trafficking [BR:
dcr04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
108210879
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
U-box type E3
108210879
Multi subunit type E3
STUB1-CHIC2 complex
108210879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
TPR_1
TPR_2
TPR_11
TPR_17
TPR_16
TPR_14
TPR_8
ANAPC3
TPR_9
zf-NOSIP
TPR_12
TPR_BSK1_C
zf-Nse
ARM_TT21_C
TPR_CcmH_CycH
Phage_tail_terminator_5
Motif
Other DBs
NCBI-GeneID:
108210879
NCBI-ProteinID:
XP_017237821
UniProt:
A0A166CIE7
LinkDB
All DBs
Position
3:complement(64175736..64181726)
Genome browser
AA seq
278 aa
AA seq
DB search
MGPTAPPTKQAEQLRQDGNSYFAKNKLSAAIDAYTEAITLCPNVPIYWTNRALCHRKRND
WIRVEEDCRRAVQLDHSSVKAHYMLGLALLQREQYADGVKELEKALDLGRGANPKSYIVE
EVWQELAKARYLEWEHASTKRSWELQSLKEACQSALKEKHDRKYSEMEGFVDDINDDYSK
QLDGLEQVFAIASEADTPTEVPDYLCCKITLDIFRDPVITPSGVTYERSVILDHLKKVGE
FDPITRKPLHQHQLVPNLAVKEAVQAFLQKHGWAYKMG
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgggccccaccgctcctcctaccaaacaggccgaacaacttcgacaagatggcaactct
tacttcgctaagaataagttgtctgctgccatcgacgcttacaccgaggcaattactttg
tgtccgaatgttccgatttattggactaaccgtgccttatgtcatcgaaagcgcaatgat
tggattcgagtcgaggaggattgcaggagagccgtccaactcgatcattcttcggtcaag
gctcattatatgcttggacttgcattgctacagagggaacaatatgcagatggagttaag
gaattggaaaaagcattggatcttggtagaggagcaaacccaaagagttacatagtggaa
gaagtgtggcaagagcttgctaaagcaagatatctagagtgggagcatgcatcaactaaa
cggtcatgggagctgcaaagcttgaaagaagcttgtcagtctgctttgaaggagaaacac
gatcgcaaatattctgaaatggaaggatttgtagatgatattaatgacgactattccaag
caattggatggtcttgaacaagtatttgctatagcttctgaagcagatacgccaacggag
gtgccagattatctatgctgtaaaattacgcttgatatcttccgtgatccagtcattact
cccagcggggttacatatgagcgctcagtgattcttgatcatcttaaaaaggtgggcgag
tttgatccaatcacgcgcaaaccacttcatcaacaccagttagtaccaaatttagcggtg
aaagaagcggtgcaagcttttttgcagaagcatggctgggcttacaagatgggttag
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