KEGG   Daucus carota (carrot): 108210894
Entry
108210894         CDS       T05350                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3 isoform X1
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
dcr  Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dcr03009]
    108210894
Ribosome biogenesis [BR:dcr03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    108210894
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 WD40_WDHD1_1st Beta-prop_EML Beta-prop_TEP1_2nd NBCH_WD40 EIF3I Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_IP5PC_F ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_VPS8 Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_WDR75_1st Beta-prop_IFT122_1st WDR54 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_LRRK2 Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_IFT140_2nd Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 108210894
NCBI-ProteinID: XP_017237841
UniProt: A0A166BZ57
LinkDB
Position
3:55242271..55247185
AA seq 449 aa
MEDEIVIASSPTDAGISCFDLHSGAEHLRYRTCASPPHSLISVGGRYLAASQLRDAAATS
GSVFYWSWNKPQVEVKCFPSEPINALVCDDDGSFIIGGGVSGDIYIWQAATGRLLKKWHA
HYRAVSSLVYVDQTTLISGAEDGCVRVWSLLMIFDDFRRNEAKHLFEYSFSEHTLRVTDI
VTGHGGCNAIIVSASEDRTCKVWSLAKGKLLRNIVFPSIIDAIALDPGEHVFYAGGRDGK
IYIAALNAQLTSTSNYGLYIIGTLSDHSKAVTCLAFAVNGHHLVSGSEDGMIRVWDTRSR
NIIRILKHAKGPVNNLLIIRRPPSLYPRTSLHSQSPSLRRPGALVPPPLEKYTNSTDDNA
DVKAVIIPQAESEIPFHASYISTYTMNSQIKELEQQGSSGATEMEIERLKLDCKRSMHML
QQWKKMYENLNEFCVNELLDGDKSRGPNA
NT seq 1350 nt   +upstreamnt  +downstreamnt
atggaagatgaaatagtgattgcgtcgtcgccgaccgacgctggaattagttgctttgac
ctacactccggcgccgaacatttacgctaccggacatgcgcctcgccgccgcacagtctt
atctccgtcggcggccgctatctcgctgcttctcaactccgtgacgccgccgcgacttct
ggctctgttttctattggtcttggaacaagcctcaggtagaagtcaagtgttttccttca
gaaccgataaatgcattagtttgtgatgatgatggaagtttcataattggaggtggcgtc
tctggagatatttacatatggcaggctgctactggcagattgctcaagaaatggcatgct
cactatagggctgtttcaagtttagtatatgttgaccaaactactctgatttctggggca
gaggatgggtgtgttcgagtgtggtcacttctcatgatttttgatgatttccgaaggaac
gaagcaaaacaccttttcgaatatagtttttccgagcacactttacgagtgactgatata
gttacaggtcatgggggatgtaatgcaatcatagtatctgcttctgaagaccggacttgc
aaggtatggagcttggctaaagggaaacttctgagaaatatagttttcccatcaataatt
gatgctatagcgttggacccaggggagcatgtcttttatgctggaggtagagatggaaag
atatatattgctgcccttaatgctcaacttacatctaccagcaattatggtctgtatatc
attggcacgctatctgatcacagcaaggctgttacttgcttggcttttgctgtaaatggg
catcatttggtttctgggtcggaagatggcatgatacgggtatgggacacaagatcccgt
aatatcattcgtatcctaaaacatgcaaaaggtcctgtgaacaatttacttataataaga
cgacctccatctttgtatcctagaacatcattgcattctcagtccccgtcattgagaaga
ccaggagccttggtgcctcctccacttgagaagtacacaaattcaacagatgacaatgcg
gatgttaaggctgtcatcattccccaggctgaatcagaaataccgtttcatgcttcgtac
atcagcacctacacaatgaatagccagatcaaagaacttgagcaacagggttcttctgga
gctactgaaatggagatagagcgactaaagcttgattgcaaacgatctatgcatatgcta
caacaatggaagaagatgtatgagaatttgaatgaattttgtgtcaatgagcttttggat
ggagacaagtccagaggacccaacgcatga

DBGET integrated database retrieval system