Daucus carota (carrot): 108210928
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Entry
108210928 CDS
T05350
Name
(RefSeq) histone acetyltransferase GCN5-like
KO
K06062
histone acetyltransferase [EC:
2.3.1.48
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108210928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcr03021
]
108210928
03036 Chromosome and associated proteins [BR:
dcr03036
]
108210928
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
108210928
Transcription machinery [BR:
dcr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
108210928
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
108210928
HAT complexes
PCAF complex
108210928
STAGA complex
108210928
TFTC complex
108210928
SAGA complex
108210928
SLIK complex
108210928
ADA-HAT complex
108210928
HAT-A2 complex
108210928
ATAC complex
108210928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
FR47
NKAP
Motif
Other DBs
NCBI-GeneID:
108210928
NCBI-ProteinID:
XP_017237879
LinkDB
All DBs
Position
3:47779582..47786475
Genome browser
AA seq
500 aa
AA seq
DB search
MDPHLPAPVRSLPSHTPSPSHSASASATSSLHKRKRASPHAPPFTSPSNDDLESISGRTS
SSDEQVVDEDEDDYDAAIRTFTSSRLEKPGNAKNKTENLAKVEAKESGAGLVVKEDSVKS
IFTENIQTSGAYSAREENLKREEEAGQLTIACVRNDGIDDHMVWLIGLKNIFARQLPNMP
KEYIVRLVMDRSHKSVMLVRRNTVVGGITYRPYLSQKFGEIAFCAITSDEQVKGYGTRLM
NHLKQHARDVDGLTHFLTYADNNAVGYFNKQGFTKEIYLEQERWHGYIKDYDGGILMECK
IDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVYTGIDFQKKEAGVPKKLIKVEDIPGL
REAGWSPDQWGHSRFKTVNASADSTANQKSLTSFMRTLLKAMYDHPDAWPFKEPVDSRDV
PDYYDIIRDPMDLKTMSKRVESEQYYVTFEMFVADARRMFSNARTYNSPETIYYKCSTRL
EAHFSTKVQTALQACLKIQQ
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggacccacacttaccggcgccggtgcgttcactcccctcccacacgccgtcgccctcc
cactctgcctccgcctccgccacctcctccctccacaaacgcaagcgcgcgtcccctcac
gcgccgcccttcacctccccctccaacgacgacctcgagagcatcagcggccgcacctcc
tcctccgacgaacaagtcgtcgacgaagacgaggacgactacgacgccgccatccgcacc
ttcacttcctcgaggctggagaaacctggaaatgcgaagaacaagacggagaatctcgcg
aaagtcgaggcgaaggagagcggcgcggggttggtggtgaaggaggatagcgtgaagagt
atttttacggagaatattcagacgagtggcgcgtatagcgccagagaagagaatttgaag
cgtgaggaggaagcaggacaactcacgattgcatgtgtaagaaatgatggtattgacgac
cacatggtttggttaataggattgaagaatatctttgccagacaactgccaaatatgcca
aaggagtacattgttcgtcttgtaatggacagaagccataaatctgtaatgcttgtcaga
cgtaacacagtagttggtgggataacataccgaccatatttaagccagaagtttggcgag
atagctttttgtgcaataacatccgatgaacaagtaaagggttatggtactagattgatg
aatcatttaaagcagcatgcacgtgatgttgatgggttgacacattttctgacttatgct
gacaataacgctgttggatattttaataaacagggctttactaaagaaatttacttggag
caagagcgctggcatgggtatatcaaagattatgacggggggatccttatggagtgcaaa
attgatcccaagctgccatacactgatttgtcaactatgatccgacgtcagaggcaggca
attgatgaaaagatccgtgaactatcaaattgtcacattgtctacactggaattgatttt
cagaagaaagaagctggtgtacctaaaaagctcatcaaagttgaggatattcctggtttg
agagaggctggatggagtcctgatcagtggggtcattctcgttttaaaacggtgaatgct
tcagctgacagcacagctaatcaaaagtcattgactagcttcatgcgtacacttcttaag
gcaatgtatgaccatcctgatgcttggccgttcaaggaaccagttgattcacgtgatgtg
cctgattattatgacataataagagatccaatggatttaaagacgatgtcgaagcgagtc
gagtcagagcaatactacgtgacattcgagatgtttgttgctgatgcaaggaggatgttt
tccaatgcacgaacatacaattctcctgaaaccatatactataaatgttcaaccaggttg
gaagcgcatttctccacaaaggttcaaacagctcttcaggcgtgtctcaaaattcaacag
taa
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