Daucus carota (carrot): 108211004
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Entry
108211004 CDS
T05350
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a
KO
K11087
small nuclear ribonucleoprotein D1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108211004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108211004
03032 DNA replication proteins [BR:
dcr03032
]
108211004
Spliceosome [BR:
dcr03041
]
Complex A
U1 snRNP components
Sm proteins
108211004
U2 snRNP components
108211004
Complex B
U1 snRNP components
108211004
U4/U6.U5 tri-snRNP components
108211004
Complex C
U2 snRNP components
108211004
DNA replication proteins [BR:
dcr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
108211004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Gemin7
EBNA2_Core
Motif
Other DBs
NCBI-GeneID:
108211004
NCBI-ProteinID:
XP_017237972
UniProt:
A0AAF1AVP0
LinkDB
All DBs
Position
3:61754615..61757775
Genome browser
AA seq
114 aa
AA seq
DB search
MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLRGKNPVTLDHLSV
RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPVGRGRGRGRGRGRGRGR
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcaggtttttgatgaaattgaacaacgagactgtctccattgagcttaag
aatgggacaattgttcacggtactatcacaggtgtggatatcagtatgaacacacattta
aagactgtaaaacttacactgagggggaagaacccagtgactctagatcacctgagtgtt
agggggaacaacatccgttactatatcttgcctgatagcttgaatcttgagaccttgttg
gtggaagagacaccgagggttaagcccaagaagccaactgcagggaggcctgtgggacgt
ggtaggggacgtggacgcgggcgtggtcgtgggcgaggccgttaa
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