Daucus carota (carrot): 108211136
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Entry
108211136 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108211136 isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108211136
Enzymes [BR:
dcr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
108211136
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
108211136
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Methyltransf_25
Methyltransf_12
Maf_flag10_N
Motif
Other DBs
NCBI-GeneID:
108211136
NCBI-ProteinID:
XP_017238142
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Position
3:complement(60326346..60330602)
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AA seq
454 aa
AA seq
DB search
MATTKCKFWLPKKKRFCTNLPLGTSPFCGNHTARNNDTWVPCPIDPSHSVLQDNLEAHLK
KCPFKKYAQSLSLLPYYSKGINGGGEGDELVDYVSSEMKRKAVLGMTAQEVSELIRKIKS
VHALICNDIQESHKIPDACGIWTNHEIDRKLPFQEKHVLQQASILGNLEDVGVIKPSGAG
GTQKNQSCANGNGSCVDDDIPAVVEFGAGRGYLTQMLADCYGIKKVFLVERKSYKLKADR
SLRQIESLTLERLRIDIEDLNLNAVESLKGIPYLAIGKHLCGPATDMTIRCCLAKHGDQD
NVAEGTVNTYLRGLALATCCHHLCQWKHYINKGYMSNLGIDRDYFHAITWFTSWAVDADH
GTALSDVVDATSHPEIMEEGRGRDSDVSGEEGISRNMSAVERALLGFMCKDIIDMGRSIW
MKEHGLDSRFLKYVPSNISPENHLLIAKHKNILF
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaacaaagtgtaaattctggctccccaagaagaagagattctgtactaatctc
cctcttggaacttcaccattctgtggaaatcatacagcaagaaacaatgatacgtgggtt
ccatgcccaattgatccttctcactctgttcttcaagataatctggaggctcatcttaag
aagtgcccttttaagaaatatgctcagtcattatcactcctgccttactatagtaagggg
attaatggtggtggagaaggggatgaattggtagattatgttagctcggaaatgaagcgg
aaagctgtgcttggtatgactgcacaagaagtgtcggaattgattaggaagattaagtct
gttcatgctttgatttgtaatgacattcaagaatcacataagattccggatgcttgtgga
atttggactaatcatgaaattgacaggaagttgccattccaagaaaaacatgtattgcag
caggcctcaattcttgggaatttggaagacgttggtgttataaagccgtctggtgcgggt
ggtacacaaaagaatcaatcatgtgctaacggcaatgggtcctgcgttgatgatgatatt
cctgcagtggttgagtttggagcagggaggggatacttgacgcaaatgcttgcagactgt
tatgggatcaaaaaagttttcttggtcgagaggaagtcatacaaacttaaggctgatcgg
agcttgcgtcagatagagagcttgactttagagcgattgagaattgatattgaggatttg
aacttaaatgctgttgaatctcttaaaggaatcccttatttggcaattggtaaacatctt
tgtggaccggcaacagatatgaccataagatgttgtttagcaaaacacggtgatcaagat
aatgttgctgaggggactgtgaacacttatctgagaggcttagcattagcaacatgctgc
catcatctttgtcagtggaagcattatataaataagggatatatgtcaaatctgggtatt
gacagagattatttccatgcaatcacatggtttaccagctgggcagtagatgcagatcat
ggtacagcactttctgatgtagtagatgccacatcacatccggaaataatggaggaagga
cgtggcagggattccgatgtatctggagaggaaggaatttcaaggaacatgagtgctgtg
gaaagagcactactgggcttcatgtgcaaagatatcattgacatgggaaggtcgatatgg
atgaaggaacatggtctggattctcggtttcttaagtacgtcccgtccaacatctctcct
gaaaatcatctgttgatcgctaagcacaagaacatattgttttaa
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