KEGG   Daucus carota (carrot): 108211192
Entry
108211192         CDS       T05350                                 
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5A
  KO
K14963  COMPASS component SWD3
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    108211192
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dcr03036]
    108211192
Chromosome and associated proteins [BR:dcr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     108211192
    NSL complex
     108211192
   HMT complexes
    COMPASS/SET1 complex
     108211192
    COMPASS/SET1 complex (yeast)
     108211192
    MLL-HCF complex
     108211192
    MLL3/MLL4 complex
     108211192
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     108211192
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st ANAPC4_WD40 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_NWD2_C Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_IFT140_1st eIF2A WD40_like Beta-prop_Vps41 Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N RMC1_N VPS8_N PROPPIN WD_LRWD1 PALB2_WD40 KNTC1_N DUF5888 Beta-prop_LRRK2 Beta-prop_VPS8 Beta-prop_NOL10_N Big_7
Other DBs
NCBI-GeneID: 108211192
NCBI-ProteinID: XP_017238211
UniProt: A0AAF0WR34
LinkDB
Position
3:43269333..43275121
AA seq 311 aa
MAIPEEPTIKPYTLQHTLNAHKRAISAVKFSDDGALLGTSSADKTVKTWSPHTGALIQDF
SGHDLGISDLAFSPDNRFLATCSDDKTVRLWDLNAATPIKTLTGHTNFVFCVNFNPQSNL
LVSGSFDETVRVWDLKSGKCLKVLPAHSDPVTAVHFDKEGALIVSSSYDGLCRIWDVSTG
HCQKTLIDDENPPVSFAKFSPNGKFILVGTLDNTLRLWNYTTGKFLKTYTGHLNSKYCIS
AAFSVTNGKYIVSGSEDNCVYLWELQSRKIVQKLEGHTDTVISVSCHPKENMIASGALAN
DKTVKIWTQSD
NT seq 936 nt   +upstreamnt  +downstreamnt
atggcaataccagaggaacccacaataaagccctacactctccaacacactctcaacgcc
cacaagcgagccatctccgccgtcaaattctccgacgacggcgcccttctcggcacctcc
tccgctgacaaaaccgtcaagacatggtccccacacaccggagccctaatccaagacttc
tccggccacgacctcggcatctccgatctcgccttctcccccgacaatcgcttcctcgcc
acctgctccgacgacaagaccgtccgcttgtgggacctcaacgcagctacccccatcaaa
accctaactggccacaccaatttcgtcttctgtgtcaattttaatccgcagtccaatttg
cttgtttcgggttctttcgacgagacggtgagagtgtgggatttaaagtcagggaagtgc
ttgaaggtgcttccggcgcattctgatcctgttactgctgtgcattttgataaggaaggg
gctctgattgtttcgagtagttatgatggtttgtgtaggatttgggatgtgtcgaccggg
cattgtcagaagacgttgattgatgatgagaatccgcctgttagtttcgccaagttttcg
cctaatggcaagtttattcttgtcgggacgttggataatacattgcggctctggaattat
acaactggcaagtttttaaagacgtacactggccatcttaattcaaagtactgcatttcg
gctgcattttcagtaacaaatgggaagtatattgttagcggttctgaggataattgtgtg
tacttgtgggaactccagtccagaaaaattgttcagaaactggaaggtcacactgacaca
gttatatcagtatcttgtcacccaaaggaaaatatgatcgcttctggtgctctagcaaat
gacaaaacagtgaagatatggacccagagtgattaa

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