Daucus carota (carrot): 108211240
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Entry
108211240 CDS
T05350
Name
(RefSeq) long chain acyl-CoA synthetase 1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00061
Fatty acid biosynthesis
dcr00071
Fatty acid degradation
dcr01100
Metabolic pathways
dcr01212
Fatty acid metabolism
dcr04146
Peroxisome
Module
dcr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108211240
00071 Fatty acid degradation
108211240
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108211240
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dcr01004
]
108211240
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcr04147
]
108211240
Enzymes [BR:
dcr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
108211240
Lipid biosynthesis proteins [BR:
dcr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
108211240
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of breast milk
108211240
Exosomal proteins of breast cancer cells
108211240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
108211240
NCBI-ProteinID:
XP_017238270
UniProt:
A0A166CC53
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All DBs
Position
3:60415069..60421325
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AA seq
662 aa
AA seq
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MSMSLFAVKTEDGRKGQDGQPSVGPVYRNPLAKDGFPPLDPELSTTWDVFSASVKKYPGN
RMLGWREFINGKWGPYVWKTYEDVYNEVLHVGAALRASGIEPGSRVGIYGMNCPQWIVAM
EACSAHSLICVPLYDTLGSSAVDYILDHAEIDIVFVQDKKLKELLKPECTHARRLKSIIS
FSSLMESEKDGALAIGIKPYTWKDFLLMGRESPAAIVPPKPFNICTIMYTSGTSGEPKGV
ILTHENISTYIRGIDIFLEQFEDKMTVDDVYISFLPLAHILDRMIEEFFFYRGASVGFYH
GEIDALKDDLLELKPTFLAAVPRVLERMHEGILKVVEDLNPRRRKIFSILYKYKLKWMKL
GYKHRDASPVADLLAFRKVSAGLGGRLRLIVSGSAPLSNEIEEFMRVTSRAFVVQGYGLT
ETCGLASIGYPDEMCMIGTVGSAFVYSELRLEEVPDMGYDPLADPPRGEVCVRARSKFAG
YYKNQELTNESMKDGWFHTGDIGEMLPNGVIKIIDRKKNLIKLSQGEYVAIEHLEKVYCI
TPIVEDIWVYGDSFKSAVVAVVVPHKGNTERWAQQNGHKGSFSQLCSLKDLTESVLQELK
STAERNKLRGFEYIKGVHLVPEPFEAEHDLVTPTLKKKRDKMLICYKVQIDELYQKLQKG
KH
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgagtttgtttgcagttaagacagaagatggccgaaaaggtcaagatgggcag
ccatcagttggtccagtgtaccgaaatccgctggccaaggatggttttccacctcttgat
ccagagttaagtacaacttgggatgtcttcagtgcatctgttaagaagtatcctggaaac
agaatgttgggatggcgtgaatttattaatggaaagtgggggccgtatgtctggaaaaca
tatgaagatgtctacaatgaggttttgcatgtaggggctgcattgagagcatctggaatt
gaacctggctctagagttggaatttatggtatgaattgtcctcaatggattgtggcaatg
gaggcttgcagtgcccactctttgatttgtgtgcctctgtacgacacacttggatccagt
gctgttgactatatactggatcacgctgagattgatatcgtttttgtacaagataagaaa
ttgaaagaactgcttaaacctgagtgcacacatgcgagacgccttaagtcaattatttct
ttctcttcgttgatggaatcagaaaaagatggggcactagccatcggaataaagccatac
acatggaaagactttcttcttatgggaagggaatctccggcagcaattgttcctccaaaa
ccattcaatatatgtacaataatgtacactagtggcactagcggagaaccaaaaggtgtt
atattgactcatgaaaacatttcaacatacataagaggaattgatatctttctggaacaa
tttgaagataagatgacagtggatgatgtctatatatctttccttccccttgctcacata
cttgatcgcatgattgaagaattctttttctatagaggtgcttcggttgggttctatcac
ggggagattgatgcattgaaagacgatttgctggagttgaagcctacgttcctggctgca
gtacctagagtcctggaaagaatgcatgaaggtatcctgaaagtcgtggaggatcttaac
ccaaggaggaggaagattttcagtattctctacaaatacaaactcaagtggatgaagtta
gggtataaacatagagatgcatcacctgtggctgatctactggccttcagaaaggtgagt
gctggattaggtggtaggcttcgcctaatagtatcgggaagtgctccattaagcaatgag
attgaagaatttatgcgagttacttcacgtgcctttgtagtgcaaggctatggcttaaca
gagacttgtggtttagcaagtattggttatccagatgagatgtgcatgatcggaactgtt
ggttcagcatttgtctatagcgagttgcgtctggaggaggttccagatatgggttacgat
ccacttgcagatcctccccgtggggaagtatgtgtgagggcaagatcaaaatttgctggt
tactacaagaatcaagaattaacaaatgaaagcatgaaagatggatggtttcacacaggt
gacataggcgaaatgctaccaaatggagtcataaaaataattgacaggaagaagaacttg
attaaactatctcaaggagagtatgtcgcaattgaacatcttgaaaaagtttactgcatc
actcccattgttgaagatatatgggtatatggagacagcttcaagtcagcagtagtggct
gtagtcgtgccacacaaaggaaacaccgagaggtgggcacagcagaatgggcacaaaggt
tccttctctcaactatgctccctaaaggacttaacagagtctgttctgcaagagcttaaa
tccacagctgaaagaaacaagttgagaggttttgaatatatcaaaggtgtacatttggtg
cccgagccctttgaagcggaacatgacctggtgactccaactctaaagaagaaaagagat
aaaatgctcatatgttacaaggtgcaaattgatgaactctaccaaaagcttcagaaaggg
aagcactga
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