Daucus carota (carrot): 108211349
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Entry
108211349 CDS
T05350
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dcr01003
]
108211349
Enzymes [BR:
dcr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
108211349
Glycosyltransferases [BR:
dcr01003
]
Polysaccharide
Structural polysaccharide
108211349
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
108211349
NCBI-ProteinID:
XP_017238411
UniProt:
A0A166B204
LinkDB
All DBs
Position
3:complement(46260360..46263899)
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AA seq
507 aa
AA seq
DB search
MCKLDEKREEKEKERRIIMKFVGEIHEERQNLMISHARTLLWIVRGMTTLLLWSFVIRLL
TMGEVWGPRLLKTWPSCFTPNMSDQVEVLHVHPNVYYPPKRVYKNNGYLMVSCNGGLNQM
RGAICDMVAIARYLNVTLIVPELDKSSFWADSSEFKDIFDVNHFITSLRSEVRILKELPP
RLKRRVDLGMFYSLPPVSWSNNSYYQHKILPLLKRYKVVHLNRTDARLANNGLPLEIQKL
RCRVNFSALRFTPQIEELGRKVVSILRQNGPFVVLHLRYEMDMLAFSGCSHGCNSEEVKE
LARMRYAYPWWKEKDINSDLKRKEGLCPLTPEETALVLTALGIDRDVQIYIAAGEIYGGE
RRMANLAAAFPNLVRKEKLLDPSELGYFRNHSSQMAALDYLVSLESDIFVPTYDGNMAKV
VEGHRRYLGYKKTISLDRKLIVDLVDHYRTGSLSWDEFAYTVKEAHVDRMGSPRERLVVP
ERPKEEDYFYANPHECLQSLVKPFRYT
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaaattagatgaaaagagggaagagaaagagaaggagaggagaattattatgaag
tttgttggtgaaattcatgaagaaagacagaatttgatgatttctcatgctcgaacgtta
ctgtggattgttcgaggaatgacaacgttgttgctttggagttttgttattcggttgttg
acaatgggggaggtttggggtccgagattgttgaagacttggccttcttgttttactcca
aatatgagtgatcaggttgaggttttgcatgtgcatccgaatgtttattatccgcctaag
agagtgtataaaaacaatgggtatcttatggtttcttgcaatggaggactcaatcaaatg
cgaggagcaatctgcgacatggttgctattgcaagatatctgaatgtcacacttattgtt
ccagagctagataaaagttcattttgggcagattcaagtgagttcaaggacatatttgat
gttaatcatttcattacctccttgagaagtgaggtacgaattttaaaagagttgccacca
cggcttaagagaagagtggatcttggaatgttctactcattaccgcctgttagttggtcc
aacaattcctactatcagcataagatccttcctttattgaaaaggtacaaagtcgtgcat
ttgaatagaaccgatgctcgacttgcaaataatgggttgccactagagattcagaagttg
cggtgcagagttaattttagtgctctgaggttcacaccccaaattgaggagctgggtagg
aaagttgtcagcatcttaaggcaaaatggcccttttgtagtcctccatctcagatatgag
atggatatgttggctttctctggctgcagtcatggttgcaacagtgaggaagtcaaagaa
ctagcaagaatgagatatgcttatccatggtggaaagaaaaagatataaattcagacttg
aaaagaaaagaaggcttgtgtcctttgacacctgaagaaactgctctagtgttaactgct
ttgggaatcgatcgtgatgttcaaatttatattgccgctggggaaatttatggtggagaa
cggagaatggcaaacttggcagctgctttcccaaatttggttagaaaggagaaactgctg
gatccttcagaattggggtatttccggaatcactcatcacaaatggccgctctggattat
ctagtttccttggagagtgacatatttgtacctacatatgatggaaatatggctaaagtt
gttgaaggtcatagaagatatttgggatacaagaaaactatttcattggacagaaagctt
atagttgatctggttgatcattatcgcactggatcgttaagctgggatgaatttgcttat
acagtgaaggaggcacatgtagatcgtatggggagcccaagagagagactcgtggtccct
gaaagaccaaaagaagaagactatttctatgccaatccacatgagtgtttgcaatccttg
gttaagccttttaggtacacatga
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