Daucus carota (carrot): 108211803
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Entry
108211803 CDS
T05350
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00531
Glycosaminoglycan degradation
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
108211803
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dcr00536
]
108211803
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
108211803
Glycosaminoglycan binding proteins [BR:
dcr00536
]
Heparan sulfate / Heparin
Enzymes
108211803
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
108211803
NCBI-ProteinID:
XP_017238986
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All DBs
Position
3:complement(6532240..6536402)
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AA seq
561 aa
AA seq
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MGFKMSVCLWIYVLGYSVLALQYAEGNESVVEGRVDINGKSVIGLTDRDFICATLDWWPP
EKCDYGTCSWDHASLLNLDLNNEIFLNAVKAFSPLKIRLGGTLQDKVIYDTEDNKQPCTS
FVKNTSELFDFSQGCLPLKRWDALNNFFNKSGAFVIFGLNALNGRTVMPDGSRVGAWDTT
NAKSFIEYTVQKNYKIYGWELGNELCGSGVGTRVVADQYSNDTTALRNIVQQIYKGENPK
IISPGGFFDEDWFKQFLDKTPKIDAVTHHIYNLGAGVDEHLVEKILDPSYLDGEADTFSK
LQNIIKTSGTSAGAWVGEAGGAYNSGHNLVSNSFVYSFWYLDQLGMSATYDTKTYCRQTL
IGGNYGLLNTTTFVPNPDYYSALLWHRLMGRRVLSTSFSGTRKIRAYTHCAKDSNGVTLL
LINLDNSTTVKVHPTFNNSSWQQDVHHSHHHHHHSHQHRTKTIRLPPKVHLKKIATREEY
HLTAQDGNLHSRTMLLNGNPLTLDPSGKIPSLIPININSSEPITVAPYSIVFVHLPVVLP
ACRYIETITDGNERVQGFSAE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcaaaatgagtgtgtgtttgtggatttatgtgcttggttacagtgtacttgca
ttgcaatatgcagaggggaatgaaagtgttgtggaaggcagagtggatataaatggaaag
agtgtgattgggctgacggacagggatttcatatgtgctacattggattggtggccacct
gagaaatgtgattatggtacttgtagctgggaccatgcttctctccttaacctggatcta
aacaatgagattttcttaaatgcagtcaaagccttttcaccattgaagattagactaggc
ggtactttgcaagataaagtcatttatgatacagaagataacaaacaaccctgcacttca
tttgttaaaaacacctcagagctgtttgatttctcccaaggctgcctaccattaaaaaga
tgggatgcattaaacaatttctttaacaaatctggggctttcgttatattcggattgaac
gctctgaatggaagaactgtaatgcctgacggctctagagtcggagcttgggatactacc
aatgcgaaatcttttattgagtacacagtacaaaagaactacaaaatttatggctgggag
cttggaaatgaactgtgtggtagtggggtgggtacaagagttgtagcagaccaatactcg
aatgatacaactgctctacgaaatatagtgcaacaaatttacaagggggaaaatccaaaa
ataatatcgccaggaggattttttgatgaagattggttcaagcaatttcttgacaaaaca
cccaagatagatgctgtcacacatcatatctataatcttggtgcaggagttgatgagcac
cttgtggaaaagatacttgatccttcttatcttgatggtgaggctgatacgtttagcaaa
ctccagaatatcatcaagacttctgggacatcagcgggtgcatgggttggggaggctggt
ggggcatataatagcggccacaatcttgtgtccaattcatttgtgtacagtttctggtac
ttagatcagcttggcatgtctgcaacctatgatacaaagacatactgcagacaaacactg
ataggtggaaactacggtttgctcaacaccactacatttgtaccaaatccagattattat
agtgctcttttatggcacagactgatgggaagaagagtactgtccacgagcttctctgga
acaagaaaaattcgtgcttacactcattgtgcaaaagattcgaatggtgtcaccctactt
ttgatcaatctcgacaatagtacaacagttaaagtacaccccaccttcaacaacagctca
tggcaacaagatgtgcaccactctcatcaccatcatcatcatagtcaccagcatagaaca
aagaccataagattgcctcctaaagttcatttaaaaaagatagcaacgagagaggaatac
catttgacagcacaagatggaaatttacacagtagaactatgctgctaaatgggaaccca
ctgactctagatccatccggaaaaataccttcgttgatacctataaatataaattcatca
gagcccataactgtagctccctattctattgtatttgttcatctgccagttgttctccct
gcatgtaggtatattgagacgataactgatgggaacgaaagagtacagggcttttctgct
gagtag
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