Daucus carota (carrot): 108211861
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Entry
108211861 CDS
T05350
Name
(RefSeq) long chain acyl-CoA synthetase 8
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00061
Fatty acid biosynthesis
dcr00071
Fatty acid degradation
dcr01100
Metabolic pathways
dcr01212
Fatty acid metabolism
dcr04146
Peroxisome
Module
dcr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108211861
00071 Fatty acid degradation
108211861
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108211861
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dcr01004
]
108211861
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcr04147
]
108211861
Enzymes [BR:
dcr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
108211861
Lipid biosynthesis proteins [BR:
dcr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
108211861
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of breast milk
108211861
Exosomal proteins of breast cancer cells
108211861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
SpoIIM
ATS
Motif
Other DBs
NCBI-GeneID:
108211861
NCBI-ProteinID:
XP_017239059
UniProt:
A0A165ZFX5
LinkDB
All DBs
Position
3:complement(954394..959637)
Genome browser
AA seq
730 aa
AA seq
DB search
MDKFFKRRPQKVPFWQRREITDFLAVFKQNRTYGILALAVSIIVPLITTLILGKKKRKQR
GVEAAVAGESGYAVRNARQAQLLEVPWEGADTMTALFEQSCLKHSKLRCLGTREQLSKEY
ITDGSGRKHEKLHLGEYKWETYGEIFDRACNFESGIIMLGHTVGTRAAIFSESRPEWFIA
LQGCLRQNITVVTIYASLGEDALVHSLNETEVSTLICDSKQLKKLPAVSSRLKTIKNVIY
FEDSDSTDDPKTYKDMSNWTMSSFSEVENLGKNNTPPYQKPNKSDIAVIMYTSGSTGLPK
GVMMTHSNLVASAAAVLTVIPKIASSDVFLAYLPLAHVLELVAEIVMFSAGMSIGYGSPL
TITDVSNKIKKGTEGDASALKPTLLPSVPAILDRVRDGVLKKVGDTGGITKVLFNFAYKR
RVAAIEGSWFGAWGLEKLLWDLLVFKKIRSVLGGDIRAMLCGGAPLSGDTQRFVNICMGA
PIVQGYGLTETCCGGAFSEFDDTSVGRVGPPLPCCFVKLVSWDEGGYLTSDKPMPRGEAV
IGGGCVTAGYFNNDAKTNEVYKVDERGMRWFYTGDVGRFHPDGCLEIIDRKKDIVKLQHG
EYISLGKVEAALMSSNYVENIMTYADPSQKYCVALVVPSRHVLEKWAKDVGAEFKDYPEL
CNKKEAVDEVQKSLAKEAKSAKLDKFELPAKIKLMPEPWTPESGLVTAALKLKREQLKAK
FKNELEELYK
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggacaaatttttcaagagaaggcctcagaaagtgcctttctggcaaagacgagagatt
actgatttcctggcagtttttaaacagaacagaacatatgggattcttgcccttgctgta
tccataattgttcctctgattaccactctaattttggggaaaaagaagcggaagcagcgc
ggagtcgaggctgcagttgctggagagtcaggctatgcagtgcgcaatgcacgccaagcc
caattgcttgaagttccctgggaaggtgcagatactatgacagctctgttcgagcagtcg
tgtttgaagcattctaagttacggtgcctaggaacgagggagcagctaagcaaggagtat
ataacagatggtagtggaaggaagcatgagaagcttcatttaggggagtacaaatgggag
acttatggcgagatatttgaccgtgcttgcaactttgagtctggaattattatgttaggt
catacagtgggtactcgtgctgccatattttcagagagtcggcctgagtggtttatagca
ttgcagggttgcttgcgacagaacataactgttgttaccatctatgcttctttaggtgaa
gatgctctagttcactccctcaatgagactgaagtatcaacattgatatgtgattctaaa
caattgaagaagttgcctgctgtaagttcgaggctgaaaaccataaagaatgtgatttat
tttgaagacagtgatagcacagatgatccaaaaacttacaaggatatgagtaattggact
atgtcttctttttccgaggttgaaaatctggggaagaataatacaccgccttaccaaaaa
ccaaacaagagtgatattgcggtcatcatgtatacaagtggcagtacaggtctgccaaag
ggagttatgatgacccatagtaatcttgtggcgagtgctgctgcggtcctgactgtgatc
cctaagatagccagcagtgacgtgtttttggcatacttaccactagctcatgttctagag
ttggtagctgagattgtgatgttcagtgcaggcatgtcaattggttatggctcaccactg
acgataacagacgtatctaacaaaattaagaaagggaccgagggagatgcttctgcgcta
aaacccactttacttccatcagttccagcaattttggatcgtgtgcgagatggagttttg
aagaaggttggggatactggaggtattacaaaagtacttttcaattttgcctacaagcgc
cgagttgcagccatagaaggtagctggtttggagcctggggactagaaaagttattgtgg
gatttgcttgtattcaaaaagataagatctgtacttggtggagatatccgtgccatgcta
tgtggaggagctccattatcaggagatacacaacgattcgttaacatctgtatgggggct
cctattgttcaaggttatggtctgacagaaacatgttgcggaggtgccttttctgagttt
gatgacacttcagttggtcgagttgggccacctctcccttgctgctttgttaagcttgtt
tcttgggacgaaggtggttatttgacatctgacaaaccaatgccacgaggagaggctgta
attggtggtggctgtgtaactgctggttactttaacaatgatgcaaaaacaaatgaggtc
tataaggttgatgagaggggcatgcgctggttttacacaggtgacgttggaaggtttcac
cctgatggatgccttgaaattattgatagaaagaaggacattgttaaacttcaacatggg
gagtatatctcccttggcaaggttgaggcagccttgatgtctagcaattatgttgaaaat
ataatgacatatgcagatccttcgcagaaatattgtgtagctctagttgtcccctcacgt
catgtccttgagaagtgggccaaagatgttggtgctgagttcaaggactatcccgagttg
tgcaacaaaaaggaagctgtagacgaggtccaaaaatctcttgccaaggaagcaaaatcg
gcaaagttggacaagtttgaacttcctgcaaagattaagttgatgccagaaccatggact
ccagaatctggtttagttactgcagctctgaagttgaagagggagcaattaaaggccaag
ttcaagaacgagcttgaagagttgtataagtga
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