Daucus carota (carrot): 108211978
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Entry
108211978 CDS
T05350
Name
(RefSeq) LOW QUALITY PROTEIN: myosin-2
KO
K10357
myosin V
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108211978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108211978
04131 Membrane trafficking [BR:
dcr04131
]
108211978
03029 Mitochondrial biogenesis [BR:
dcr03029
]
108211978
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dcr04812
]
108211978
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108211978
mRNA cycle factors
P-body specific factors
108211978
Membrane trafficking [BR:
dcr04131
]
Others
Actin-binding proteins
Myosins
108211978
Mitochondrial biogenesis [BR:
dcr03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108211978
Cytoskeleton proteins [BR:
dcr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108211978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
IQ
Motif
Other DBs
NCBI-GeneID:
108211978
NCBI-ProteinID:
XP_017239201
LinkDB
All DBs
Position
3:complement(324651..339657)
Genome browser
AA seq
1175 aa
AA seq
DB search
MDNRPAGTTRSSLEEMLESLKERDEAEHPKDLPPALPSRPNSRARRPSVAKRSLPNLISV
PDSSNKVKKKREYKRSSGGSFGGKKPKEPRPDESPYASVTISDVNFEENLENGDKDSADF
AVKSSSFPKFKEPELNENLGYFIKKKLRVWCQLKDGQWELGHIQSTSAETASVLLGNGSL
VIASTGELLPANPDILEGVDDLIQLSYLNEPSVLHNLQFRFTHDKFYSKAGSVLIAINPF
KKLKLYGNDYITAYRQKLMDSPHVYAITDTAYSEMMRDEVNQSLIIRXVILLNVHELKTF
TVKFCSGESGAGKTETAKIAMQYLGALSGGSGGMDQKIYQTSSILEAFGNAKTSRNDNSS
RFGKLIEIYFSATGTICGAKIQTFLLEKSRVVQLAQGERSYHIFYQICAGASSVLKEKLN
LKAASEYKYLNQSSRLVVDNVNDAEKFAQLMEALNTIHLSEEDQQHAFEMLAAVLWMGNI
SFQVAENENYVEVLSDEACKMVASLLGCSLEDLILALSTHKIRAGKETVAKKLTLQQAID
TRDALAKFVYASLFEWLVEKINRSLVKGRWQSRRSISILDIYGFESFKKNSFEQFCINYA
NERLQQHFNRHLFKLQQEEYESDGIDWTKVEFEDNQECLDLFEKKPIGLISLLDEESNFP
NGSDLTFANKLKQHLEDHPSFKGERGGAFSVRHYAGEVLYNTTGFLEKNRDPLQPDTIQL
LSSCSRQLPQLFASNMQSQTPKPPSNGPGASELHRKSVGTKFKGQLFKLMQQLNNCTPHF
IRCIKPNSKLLPGLYEKPLVLEQLRCCGVLEVVRISRSGYPTRVTHQEFAERYGFLLSEF
GVTQDPLSISASVLQQFGIQPEMYQVGYTKLYFRVGQIGALEDTRKRVLQGTLEVQKHFR
RHLAYRYFKELKRGTITLQSFVRADIVKRKYSVMINLRQQVAKRLNDQLSAAVQLQSVIR
GLLVRKHINHLQNSSGTQDLMNSTVKSKLNWPSAVAVLQKRVLEAEAAVSKLEEEKTALR
VLVEQHENRLLEYQAKVKSIEEMWEMKIASLQRSLAAARKGDSDNASGQPGGSPLTKHSN
WSRSRNAISHLSKEFESQSQNFDNEALAIVEVNSESTNFDEEFRVLKQKFDSWERDYKAR
LRDARAKLQKQQEAERHQQHHHHRWLWILRTLKFK
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggataacaggccggctggaacaactcgtagctcgcttgaggaaatgcttgagtccctc
aaggagagggacgaggcagagcatcccaaggacttgcccccggcactgccatcaaggcct
aattctcgagctcgtagaccgtctgttgcgaaacggtcattgccaaatttaattagtgta
cctgattctagtaataaggtgaagaagaagagagagtataaaagatcatcagggggtagt
tttggagggaagaaacctaaggaacctagaccagacgaatcgccttatgcttctgttaca
ataagtgatgtcaatttcgaggagaatttggagaacggtgataaggacagtgctgatttt
gctgttaaatcttcttcatttccgaagtttaaagagcctgagttgaatgagaatctcggt
tatttcatcaaaaagaaactacgagtttggtgtcaacttaaagacgggcagtgggaatta
ggacacatacaatcaacttctgcagaaacagcgtccgtgttgcttggaaatggaagtttg
gtgatagcgagtaccggagaactgttacctgcaaatcctgatatccttgagggtgtagat
gatcttatacagcttagttacttgaatgagccatcagtgcttcataaccttcaattcaga
tttactcatgataaattttatagtaaggctggatctgttttgattgcaatcaatcccttt
aagaagctcaaactctacggtaacgattatatcacagcttacaggcaaaagcttatggat
agccctcatgtatatgccataactgatactgcctatagcgaaatgatgagagatgaagta
aatcaatcactaataataaggtaggtgattctactcaacgtacatgagttgaaaactttt
accgtcaaattttgtagtggggaaagtggagctggaaaaactgaaacagcaaaaattgct
atgcaatacttaggcgctcttagtggtggtagtggcggtatggaccagaaaatatatcaa
acaagtagtatactagaagcatttggtaatgcaaaaacttccagaaatgacaactccagt
cgatttggaaaactaatagaaatttattttagtgctacggggacgatatgcggtgctaaa
attcagacttttctgcttgaaaagtcgagagttgttcagctggcacagggggagaggtcg
tatcatatcttctatcagatttgtgctggggcttcatctgttctgaaagagaagttgaat
ttaaaagcagcgagcgagtacaaataccttaatcaaagtagtcgcttggtagttgacaat
gttaatgatgctgagaaatttgcacaacttatggaagccctaaatacgattcatttgtct
gaagaagatcaacaacatgcttttgaaatgttagctgccgtattatggatgggaaacata
tcatttcaagttgctgaaaatgaaaattatgtggaggttttgtctgatgaagcatgcaaa
atggttgctagtttgctaggttgcagtttagaggaccttatactagctttatctacccat
aaaattcgggctgggaaggagactgttgctaagaaattaacactacagcaggcaattgat
acaagagatgcattggcaaaatttgtatatgcaagcctgtttgaatggcttgtagagaaa
atcaataggtcacttgtgaaaggtagatggcaaagcaggagatccataagtattctagat
atttatgggttcgagtcatttaagaaaaatagctttgaacagttttgtataaactatgca
aatgagagactgcagcagcactttaaccgtcatctatttaaacttcagcaagaggagtat
gagtcagatggaattgattggacaaaagtagaatttgaagacaaccaagagtgcttggat
ctgtttgagaagaaacccattggattaatatctttattggatgaggaatcaaattttccc
aatggcagtgatttgacatttgccaataagctgaagcagcacttggaggatcatcctagc
tttaaaggagaaagaggtggagctttcagtgttcgccactatgctggagaggttctatac
aacaccaccggcttcttggaaaagaacagagatccattgcaacctgatactatccagcta
ctttcatcgtgcagtagacagctacctcagttgtttgcctccaacatgcaaagccaaact
ccaaaaccaccaagtaatggccctggagcatctgagctccatagaaaaagtgttggaacg
aagtttaaaggccaattgttcaaactgatgcaacagttgaataactgtacaccacacttt
attcgctgtattaaaccaaattctaaactgcttcctggattatatgaaaagcctctcgtc
ttagagcaactacgatgctgtggagttctggaggtagtcaggatatcaagatctgggtat
cctacgcgagtgacacatcaagaatttgcagaaagatatgggttcctgctttcggagttt
ggtgtcactcaagatccactaagtatatcagcctccgtgcttcagcaatttgggatccag
cctgaaatgtatcaagttggttatacaaagttatatttccgagttgggcagattggtgca
ttagaggatactagaaaacgagttttacaaggtacccttgaggtgcagaaacactttcgt
cgtcatctggcttatcgttacttcaaggaactgaagagaggcacgataacactgcaatca
tttgttcgtgcagatattgttaaaagaaagtacagtgttatgataaatttgaggcagcag
gttgcgaaaagacttaatgatcaattgagtgctgctgttcaattgcaatctgtaatacgt
gggctgttggtccgaaagcatattaatcacttgcagaattctagcggcacccaggacctg
atgaattctactgtaaagagtaagctaaactggccttcagccgtagcagtgcttcaaaag
cgggttttagaggcagaagctgccgttagcaaactggaagaggaaaaaacagcactcaga
gttctagtagaacaacatgaaaatcggttgttggaataccaagctaaggtgaaatcaatt
gaggaaatgtgggaaatgaagatagcatccttgcaaaggagccttgctgctgctagaaag
ggtgattctgacaatgcttctggtcagcctggtgggagccctctcaccaaacacagtaac
tggtcgagaagtcgtaatgcaatcagtcatctctcgaaagaatttgagagccagtcacag
aactttgataatgaagctctcgctattgtagaggtcaactcagaatcaacaaattttgat
gaagagtttcgggtcctgaaacaaaaatttgattcttgggagagagattacaaagctcgt
ttgcgggatgccagggcaaaattgcaaaagcaacaagaagcagaaagacatcaacagcat
caccaccacagatggttgtggatactgaggactttaaagtttaaatag
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integrated database retrieval system
